| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is yebQ [H]
Identifier: 218689765
GI number: 218689765
Start: 1979476
End: 1980849
Strand: Direct
Name: yebQ [H]
Synonym: ECED1_2032
Alternate gene names: 218689765
Gene position: 1979476-1980849 (Clockwise)
Preceding gene: 218689763
Following gene: 218689770
Centisome position: 38.0
GC content: 51.46
Gene sequence:
>1374_bases ATGCCAAAAGTTCAGGCCGACGGCCTGCCATTGCCCCTGCGATACGGTGCGATATTAACCATTGTGATTGGTATTTCGAT GGCTGTCCTTGACGGCGCAATCGCCAACGTCGCCTTGCCAACAATCGCTACGGACCTTCATGCCACGCCAGCCAGTTCCA TCTGGGTAGTGAACGCCTATCAAATCGCCATTGTCATCTCCCTGCTCTCGTTTTCGTTTCTGGGCGATATGTTTGGCTAT CGACGTATTTATAAATGCGGTCTGGTCGTTTTTCTGTTGTCTTCACTGTTCTGCGCCCTTTCTGATTCGCTGCAAATGCT CACCCTTGCGCGTGTCATACAAGGTTTCGGCGGTGCAGCGTTGATGAGCGTTAATACCGCACTTATCCGCCTGATCTATC CACAACGTTTTCTGGGTAGAGGGATGGGCATAAACTCGTTTATTGTTGCCGTCTCTTCTGCTGCCGGGCCGACAATTGCT GCAGCAATCCTCTCCATCGCATCCTGGAAATGGTTATTTTTAATCAACGTACCGTTGGGTATTATCGCCCTGCTTCTGGC GATGCGTTTTCTGCCACCCAATGGTTCTCGCGCCAGTAAACCCCGTTTCGACCTGCCCAGCACCGTGATGAACGCGTTAA CCTTCGGCCTGCTTATCACTGCGTTGAGTGGTTTCGCTCAGGGGCAATCGCTGACATTGATTGGTGCGGAACTGGTGGTA ATGGTTGTCGTTGGTATTTTCTTTATTCGCCGCCAGCTTTCTCTTCCCGTACCGCTGCTACCGGTGGATTTACTGCATAT CCCGCTGTTTTCACTTTCTATTTGCACATCTGTTTGCTCTTTCTGCGCACAAATGCTGGCAATGGTTTCCCTGCCCTTTT ACCTGCAAACCGTGCTCGGGCGTAGTGAAGTCGAAACAGGTTTACTTCTGACACCGTGGCCGTTAGCAACGATGGTGATG GCTCCACTGGCAGGCTATTTGATTGAACGCGTACATGCAGGATTGCTGGGTGCTTTAGGGTTATTCATCATGGCTGCGGG GCTTTTTTCCCTGGTTCTGCTGCCAGCGTCACCTACGGATATCAATATTATCTGGCCGATGATCTTATGTGGTGCTGGAT TTGGCTTGTTCCAGTCACCCAATAACCACACCATTATTACCTCCGCTCCTCGCGAACGTAGCGGTGGAGCCAGTGGCATG TTAGGGACAGCTCGTCTTCTGGGTCAGAGTAGCGGCGCGGCTCTGGTAGCGCTGATGCTAAATCAGTTTGGTGATAATGG TACGCACGTCTCGCTGATAGCTGCGGCTATTCTGGCATTGATTGCTGCCTGTGTCAGTGGTTTACATATCACTCAGCCAC GATCCAGGGCATAA
Upstream 100 bases:
>100_bases CCATCTTTTGCCGGTTAGTTACAATTCTGCGACATCCACCGTGAATATCAGTGCTAGAATCATACCCCTGTTGATTATTC ACCAAAGATATAAAATTCCT
Downstream 100 bases:
>100_bases AAAAAGCGCGTCGATCAGGACGCGCTTTTTAGTATTTACTTCATATTACTTCAGGTATTCACCCGTACGCAGAGCTTCAA TACGTTTATCCAGCGGCGGG
Product: putative MFS superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MPKVQADGLPLPLRYGAILTIVIGISMAVLDGAIANVALPTIATDLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGY RRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIA AAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSTVMNALTFGLLITALSGFAQGQSLTLIGAELVV MVVVGIFFIRRQLSLPVPLLPVDLLHIPLFSLSICTSVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVM APLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPTDINIIWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGM LGTARLLGQSSGAALVALMLNQFGDNGTHVSLIAAAILALIAACVSGLHITQPRSRA
Sequences:
>Translated_457_residues MPKVQADGLPLPLRYGAILTIVIGISMAVLDGAIANVALPTIATDLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGY RRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIA AAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSTVMNALTFGLLITALSGFAQGQSLTLIGAELVV MVVVGIFFIRRQLSLPVPLLPVDLLHIPLFSLSICTSVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVM APLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPTDINIIWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGM LGTARLLGQSSGAALVALMLNQFGDNGTHVSLIAAAILALIAACVSGLHITQPRSRA >Mature_456_residues PKVQADGLPLPLRYGAILTIVIGISMAVLDGAIANVALPTIATDLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYR RIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIAA AILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSTVMNALTFGLLITALSGFAQGQSLTLIGAELVVM VVVGIFFIRRQLSLPVPLLPVDLLHIPLFSLSICTSVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMA PLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPTDINIIWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGML GTARLLGQSSGAALVALMLNQFGDNGTHVSLIAAAILALIAACVSGLHITQPRSRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=457, Percent_Identity=98.2494529540481, Blast_Score=877, Evalue=0.0, Organism=Escherichia coli, GI1790195, Length=433, Percent_Identity=27.2517321016166, Blast_Score=122, Evalue=4e-29, Organism=Escherichia coli, GI1788710, Length=440, Percent_Identity=26.5909090909091, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1789042, Length=422, Percent_Identity=27.2511848341232, Blast_Score=115, Evalue=6e-27, Organism=Escherichia coli, GI1788392, Length=429, Percent_Identity=28.6713286713287, Blast_Score=113, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6325455, Length=167, Percent_Identity=28.1437125748503, Blast_Score=68, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48141; Mature: 48010
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKVQADGLPLPLRYGAILTIVIGISMAVLDGAIANVALPTIATDLHATPASSIWVVNAY CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHH QIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCHHHHHHHHHHHCCCEEEEEECCHH IIALLLAMRFLPPNGSRASKPRFDLPSTVMNALTFGLLITALSGFAQGQSLTLIGAELVV HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH MVVVGIFFIRRQLSLPVPLLPVDLLHIPLFSLSICTSVCSFCAQMLAMVSLPFYLQTVLG HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RSEVETGLLLTPWPLATMVMAPLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPTD HHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC INIIWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGAALVALML CHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHH NQFGDNGTHVSLIAAAILALIAACVSGLHITQPRSRA HHHCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCC >Mature Secondary Structure PKVQADGLPLPLRYGAILTIVIGISMAVLDGAIANVALPTIATDLHATPASSIWVVNAY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHH QIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSDSLQMLTLARVIQGFGGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH LMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIAAAILSIASWKWLFLINVPLG HHHHHHHHHHHHHHHHHHHCCCCCHHHHHEECCCCCHHHHHHHHHHHCCCEEEEEECCHH IIALLLAMRFLPPNGSRASKPRFDLPSTVMNALTFGLLITALSGFAQGQSLTLIGAELVV HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH MVVVGIFFIRRQLSLPVPLLPVDLLHIPLFSLSICTSVCSFCAQMLAMVSLPFYLQTVLG HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RSEVETGLLLTPWPLATMVMAPLAGYLIERVHAGLLGALGLFIMAAGLFSLVLLPASPTD HHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC INIIWPMILCGAGFGLFQSPNNHTIITSAPRERSGGASGMLGTARLLGQSSGAALVALML CHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHH NQFGDNGTHVSLIAAAILALIAACVSGLHITQPRSRA HHHCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]