Click here to switch to the map view.

The map label for this gene is yebN

Identifier: 218689757

GI number: 218689757

Start: 1974888

End: 1975454

Strand: Direct

Name: yebN

Synonym: ECED1_2024

Alternate gene names: 218689757

Gene position: 1974888-1975454 (Clockwise)

Preceding gene: 218689756

Following gene: 218689763

Centisome position: 37.91

GC content: 51.68

Gene sequence:

>567_bases
ATGAATATCACTGCTACTGTTCTTCTTGCGTTTGGTATGTCGATGGATGCATTTGCTGCATCAATCGGTAAAGGTGCCAC
CCTCCATAAACCGAAATTTTCTGAAGCGTTGCGAACCGGCCTTATTTTTGGTGCTGTCGAAACCCTGACGCCGCTGATCG
GCTGGGGAATGGGCATGTTAGCCAGCCGGTTTGTCCTTGAATGGAACCACTGGATTGCGTTTGTGCTGCTGATATTCCTC
GGCGGACGAATGATTATTGAGGGTTTTCGTGGCGCAGATGATGAAGATGAAGAGCCGCGCCGTCGACACGGTTTCTGGCT
ACTGGTAACCACCGCGATTGCCACCAGCCTGGATGCCATGGCTGTGGGTGTTGGTCTTGCTTTCCTGCAGGTCAACATTA
TCGCGACCGCATTGGCCATTGGTTGTGCAACCTTGATTATGTCGACATTAGGGATGATGGTTGGTCGCTTTATCGGCTCA
ATTATTGGGAAGAAAGCGGAAATTCTCGGCGGGCTGGTACTGATCGGCATCGGCGTCCAGATCCTCTGGACGCACTTCCA
CGGTTAA

Upstream 100 bases:

>100_bases
GCCTGCATGAACGCGAAAACCATCGCGGCTTGTTGTTCATGTTTGCATGTTTGCTGGGGGCGATGATGTGTTTTATGGAT
ACCCCGGTCAGGACGTTGTC

Downstream 100 bases:

>100_bases
TAAGAACGCTGCCAGAGGTGAATATTAAAGTCCGTCTGGCTGTCGAACACTTCTTTTGCTGCCAGTGTTTGCCAGACTTC
TGGCTTCGCACGCCAGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFL
GGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGS
IIGKKAEILGGLVLIGIGVQILWTHFHG

Sequences:

>Translated_188_residues
MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFL
GGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGS
IIGKKAEILGGLVLIGIGVQILWTHFHG
>Mature_188_residues
MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFL
GGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGS
IIGKKAEILGGLVLIGIGVQILWTHFHG

Specific function: Unknown

COG id: COG1971

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0059 family

Homologues:

Organism=Escherichia coli, GI87081981, Length=188, Percent_Identity=100, Blast_Score=367, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YEBN_ECO24 (A7ZMU3)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001463122.1
- ProteinModelPortal:   A7ZMU3
- STRING:   A7ZMU3
- EnsemblBacteria:   EBESCT00000019028
- GeneID:   5590308
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_2050
- eggNOG:   COG1971
- GeneTree:   EBGT00050000009208
- HOGENOM:   HBG709685
- OMA:   WDHWVAF
- ProtClustDB:   PRK11469
- BioCyc:   ECOL331111:ECE24377A_2050-MONOMER
- HAMAP:   MF_01521
- InterPro:   IPR003810
- InterPro:   IPR022929

Pfam domain/function: PF02659 DUF204

EC number: NA

Molecular weight: Translated: 20117; Mature: 20117

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x202eed9c)-; HASH(0x2147519c)-; HASH(0x1f9c03c8)-; HASH(0x2173c840)-; HASH(0x21475298)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGML
CCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAM
HHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH
AVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ILWTHFHG
HHHHHCCH
>Mature Secondary Structure
MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGMGML
CCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRRHGFWLLVTTAIATSLDAM
HHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHH
AVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ILWTHFHG
HHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA