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The map label for this gene is ydjK

Identifier: 218689716

GI number: 218689716

Start: 1933608

End: 1934987

Strand: Reverse

Name: ydjK

Synonym: ECED1_1979

Alternate gene names: 218689716

Gene position: 1934987-1933608 (Counterclockwise)

Preceding gene: 218689717

Following gene: 218689715

Centisome position: 37.14

GC content: 49.2

Gene sequence:

>1380_bases
ATGGAACAGATAACAAAACCGCATTGTGGTGCACGGCTGGATCGCTTACCGGATTGCCGCTGGCATTCGTCGATGTTTGC
CATCGTCGCGTTTGGCTTGCTTGTCTGCTGGAGTAATGCCGTTGGTGGCTTGATCCTCGCGCAGCTGAAAGCGTTGGGCT
GGACAGATAATTCCACCACTGCCACATTCTCAGCAATCACGACCGCCGGAATGTTTCTCGGTGCGCTGGTGGGCGGCATC
ATCGGTGACAAAACCGGTCGCAGAAATGCGTTTATCCTCTATGAGGCCATTCATATTGCTTCGATGGTTGTCGGTGCTTT
CTCACCGAATATGGATTTCCTTATTGCCTGCCGTTTTGTGATGGGCGTTGGGCTGGGAGCTTTACTGGTTACACTGTTTG
CTGGTTTCACCGAATATATGCCCGGAAGAAATCGCGGAACGTGGTCCAGTCGGGTTTCCTTTATTGGTAACTGGTCATAT
CCGCTCTGTTCATTGATTGCGATGGGACTCACGCCGCTGATTAGTGCAGAGTGGAACTGGCGGGTACAACTGCTTATCCC
TGCAATATTGTCACTTATCGCTACGGCGCTGGCCTGGCGCTACTTTCCTGAATCCCCGCGCTGGCTGGAATCGCGCGGAC
GGTATCAGGAAGCCGAGAAAGTCATGCGGAGTATAGAAGAAGGCGTCATACGCCAGACGGGTAAACCTTTGCCGCCTGTG
GTTATTGCTGATGACGGTAAAGCACCACAAGCGGTGCCGTATTCAGCCTTACTGACAGGAGTATTACTGAAACGCGTGAT
ATTAGGCTCTTGTGTGCTGATTGCCATGAACGTTGTGCAGTACACACTAATTAACTGGTTGCCAACGATATTCATGACCC
AGGGAATTAATTTAAAAGACTCGATTGTTTTAAATACCATGAGTATGTTTGGCGCGCCATTTGGTATTTTTATTGCCATG
CTGGTGATGGATAAAATTCCGCGTAAAACAATGGGTGTGGGGCTATTAATCCTGATTGCGGTGCTCGGATATATCTATTC
ACTGCAAACCAGTATGTTGCTCATAACGCTGATTGGTTTCTTCCTGATTACTTTCGTCTATATGTACGTTTGCTATGCCT
CGGCAGTGTATGTCCCTGAGATCTGGCCGACAGAGGCCAAACTCCGTGGCTCCGGTCTGGCGAATGCGGTAGGGCGAATC
AGTGGTATTGCCGCGCCTTATGCCGTTGCAGTGCTGCTCAGTAGTTATGGCGTAACGGGAGTCTTTATTCTTCTGGGGGC
TGTTTCAATTATTGTCGCAATTGCTATCGCCACCATTGGAATTGAAACCAAAGGTGTCTCCGTTGAAAGTTTAAGTATTG
ATGCAGTAGCCAATAAATAA

Upstream 100 bases:

>100_bases
GGCGCGAAGGGTTTGATGCGATGGTCGATAAAACTGCAATCAAAGTGATCATGACTTACGACTTTGATGAATAACTACTC
TCCTGAAGGAACGTTATCGC

Downstream 100 bases:

>100_bases
TACTGGTGGATTCAAAATGAAAAATTCAAAAGCAATATTGCAGGTGCCGGGCACAATGAAAATTATTTCAGCAGAAATAC
CTGTGCCTAAAGAAGATGAA

Product: putative MFS superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 459

Protein sequence:

>459_residues
MEQITKPHCGARLDRLPDCRWHSSMFAIVAFGLLVCWSNAVGGLILAQLKALGWTDNSTTATFSAITTAGMFLGALVGGI
IGDKTGRRNAFILYEAIHIASMVVGAFSPNMDFLIACRFVMGVGLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSY
PLCSLIAMGLTPLISAEWNWRVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEAEKVMRSIEEGVIRQTGKPLPPV
VIADDGKAPQAVPYSALLTGVLLKRVILGSCVLIAMNVVQYTLINWLPTIFMTQGINLKDSIVLNTMSMFGAPFGIFIAM
LVMDKIPRKTMGVGLLILIAVLGYIYSLQTSMLLITLIGFFLITFVYMYVCYASAVYVPEIWPTEAKLRGSGLANAVGRI
SGIAAPYAVAVLLSSYGVTGVFILLGAVSIIVAIAIATIGIETKGVSVESLSIDAVANK

Sequences:

>Translated_459_residues
MEQITKPHCGARLDRLPDCRWHSSMFAIVAFGLLVCWSNAVGGLILAQLKALGWTDNSTTATFSAITTAGMFLGALVGGI
IGDKTGRRNAFILYEAIHIASMVVGAFSPNMDFLIACRFVMGVGLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSY
PLCSLIAMGLTPLISAEWNWRVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEAEKVMRSIEEGVIRQTGKPLPPV
VIADDGKAPQAVPYSALLTGVLLKRVILGSCVLIAMNVVQYTLINWLPTIFMTQGINLKDSIVLNTMSMFGAPFGIFIAM
LVMDKIPRKTMGVGLLILIAVLGYIYSLQTSMLLITLIGFFLITFVYMYVCYASAVYVPEIWPTEAKLRGSGLANAVGRI
SGIAAPYAVAVLLSSYGVTGVFILLGAVSIIVAIAIATIGIETKGVSVESLSIDAVANK
>Mature_459_residues
MEQITKPHCGARLDRLPDCRWHSSMFAIVAFGLLVCWSNAVGGLILAQLKALGWTDNSTTATFSAITTAGMFLGALVGGI
IGDKTGRRNAFILYEAIHIASMVVGAFSPNMDFLIACRFVMGVGLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSY
PLCSLIAMGLTPLISAEWNWRVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEAEKVMRSIEEGVIRQTGKPLPPV
VIADDGKAPQAVPYSALLTGVLLKRVILGSCVLIAMNVVQYTLINWLPTIFMTQGINLKDSIVLNTMSMFGAPFGIFIAM
LVMDKIPRKTMGVGLLILIAVLGYIYSLQTSMLLITLIGFFLITFVYMYVCYASAVYVPEIWPTEAKLRGSGLANAVGRI
SGIAAPYAVAVLLSSYGVTGVFILLGAVSIIVAIAIATIGIETKGVSVESLSIDAVANK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Homologues:

Organism=Homo sapiens, GI4507005, Length=379, Percent_Identity=25.3298153034301, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI73695465, Length=215, Percent_Identity=24.6511627906977, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI24497490, Length=393, Percent_Identity=23.4096692111959, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI262399383, Length=200, Percent_Identity=25.5, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI7662270, Length=209, Percent_Identity=24.8803827751196, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI302148518, Length=378, Percent_Identity=23.2804232804233, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1788074, Length=459, Percent_Identity=100, Blast_Score=922, Evalue=0.0,
Organism=Escherichia coli, GI1788068, Length=455, Percent_Identity=43.7362637362637, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI87082159, Length=411, Percent_Identity=25.3041362530414, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1786229, Length=430, Percent_Identity=24.6511627906977, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1789207, Length=417, Percent_Identity=23.9808153477218, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789312, Length=419, Percent_Identity=21.0023866348449, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17554160, Length=416, Percent_Identity=25.2403846153846, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI32565921, Length=216, Percent_Identity=26.3888888888889, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193209824, Length=359, Percent_Identity=25.0696378830084, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17542342, Length=400, Percent_Identity=23.25, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32564663, Length=409, Percent_Identity=22.4938875305623, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24640198, Length=440, Percent_Identity=21.5909090909091, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24640196, Length=440, Percent_Identity=21.5909090909091, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24640200, Length=440, Percent_Identity=21.5909090909091, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDJK_ECOLI (P76230)

Other databases:

- EMBL:   U00096
- EMBL:   AP009048
- PIR:   G64937
- RefSeq:   AP_002394.1
- RefSeq:   NP_416289.1
- ProteinModelPortal:   P76230
- STRING:   P76230
- EnsemblBacteria:   EBESCT00000002450
- EnsemblBacteria:   EBESCT00000017654
- GeneID:   946293
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5290
- KEGG:   eco:b1775
- EchoBASE:   EB3260
- EcoGene:   EG13487
- eggNOG:   COG0477
- GeneTree:   EBGT00050000008817
- HOGENOM:   HBG715489
- OMA:   ATATIWK
- ProtClustDB:   CLSK880193
- BioCyc:   EcoCyc:B1775-MONOMER
- Genevestigator:   P76230
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 49603; Mature: 49603

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS50850 MFS; PS00216 SUGAR_TRANSPORT_1; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x211236f8)-; HASH(0x21289244)-; HASH(0x208652f4)-; HASH(0x21589208)-; HASH(0x20593428)-; HASH(0x20f47cf8)-; HASH(0x1f78eec4)-; HASH(0x2168dfa8)-; HASH(0x1f39b254)-; HASH(0x20ecb2dc)-; HASH(0x1f2d7ac4)-; HASH(0x20722264)-;

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCH
>Mature Secondary Structure
MEQITKPHCGARLDRLPDCRWHSSMFAIVAFGLLVCWSNAVGGLILAQLKALGWTDNSTT
CCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ATFSAITTAGMFLGALVGGIIGDKTGRRNAFILYEAIHIASMVVGAFSPNMDFLIACRFV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHH
MGVGLGALLVTLFAGFTEYMPGRNRGTWSSRVSFIGNWSYPLCSLIAMGLTPLISAEWNW
HHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCCC
RVQLLIPAILSLIATALAWRYFPESPRWLESRGRYQEAEKVMRSIEEGVIRQTGKPLPPV
CCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCE
VIADDGKAPQAVPYSALLTGVLLKRVILGSCVLIAMNVVQYTLINWLPTIFMTQGINLKD
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
SIVLNTMSMFGAPFGIFIAMLVMDKIPRKTMGVGLLILIAVLGYIYSLQTSMLLITLIGF
HHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLITFVYMYVCYASAVYVPEIWPTEAKLRGSGLANAVGRISGIAAPYAVAVLLSSYGVTG
HHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VFILLGAVSIIVAIAIATIGIETKGVSVESLSIDAVANK
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503