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The map label for this gene is ydjH [H]

Identifier: 218689713

GI number: 218689713

Start: 1930739

End: 1931686

Strand: Reverse

Name: ydjH [H]

Synonym: ECED1_1976

Alternate gene names: 218689713

Gene position: 1931686-1930739 (Counterclockwise)

Preceding gene: 218689714

Following gene: 218689712

Centisome position: 37.08

GC content: 44.83

Gene sequence:

>948_bases
ATGGATAATCTCGACGTTATTTGTATAGGTGCCGCTATTGTTGATATTCCATTGCAACCGGTCAGTAAAAATATCTTTGA
TGTGGATTCTTATCCTCTTGAAAGAATCGCAATGACCACCGGGGGGGATGCAATAAATGAAGCAACAATTATTTCTCGTC
TGGGCCATCGCACAGCATTAATGAGTCGTATTGGTAAAGATGCCGCAGGGCAATTTATTCTCGACCATTGCCGCAAAGAG
AATATTGATATTCAAAGCCTGAAGCAGGACGTCAGCATAGATACCTCTATTAACGTTGGACTGGTGACGGAGGATGGTGA
GCGGACCTTTGTCACAAACCGTAACGGCAGTCTGTGGAAATTGAATATTGACGATGTTGATTTTGCGCGGTTTTCTCAGG
CGAAATTATTATCACTGGCCAGTATTTTCAACAGTCCTCTATTGGATGGTAGAGCGCTAACAGAAATTTTTACGCAAGCT
AAAACCCGGCAGATGATTATCTGTGCCGATATGATCAAACCGCGGTTGAATGAAACGCTGAATGATATTTGCGAAGCATT
GAGTTATGTCGATTATCTGTTTCCTAATTTTGCCGAGGCAAAATTACTCACCGGGAAAGAGACACTGGATGAAATTGCTG
ACTGCTTTCTTGCGTGCGGCGTAAAAACGGTGGTGATTAAAACGGGTAAAGACGGCTGCTTTATCAAGCGTGGTGACATG
ACGATGAAGGTGCCGGCGGTCGCAGGAATAACCGCTATCGACACCATTGGTGCGGGCGATAACTTTGCTTCAGGTTTTAT
TGCAGCACTGTTAGAAGGTAAAAATCTGCGTGAATGCGCACGCTTTGCCAATGCAACGGCGGCTATCTCGGTTCTAAGCA
TCGGCGCCACCACCGGTGTAAAAAACAGAAAGCTGGTCGAACAATTGCTGGAAGAATACGAAGGATAA

Upstream 100 bases:

>100_bases
CCTTTCCTGCATTTAGAACGTGAAGTGCGTAAAGCTATAAAAGAACGGGCATTGGATAAAATTAAACTGTTCGGTTCTGA
TGGCAAAGCGGAATAATAAT

Downstream 100 bases:

>100_bases
TGAAGGCAAATGAAAAAGATACCTTTAGGCACAACGGATATAACGCTTTCGCGAATGGGGTTGGGGACATGGGCCATTGG
CGGCGGTCCTGCATGGAATG

Product: putative sugar kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGRALTEIFTQA
KTRQMIICADMIKPRLNETLNDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSIGATTGVKNRKLVEQLLEEYEG

Sequences:

>Translated_315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGRALTEIFTQA
KTRQMIICADMIKPRLNETLNDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSIGATTGVKNRKLVEQLLEEYEG
>Mature_315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRIGKDAAGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGRALTEIFTQA
KTRQMIICADMIKPRLNETLNDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSIGATTGVKNRKLVEQLLEEYEG

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=315, Percent_Identity=98.7301587301587, Blast_Score=634, Evalue=0.0,
Organism=Escherichia coli, GI1790193, Length=301, Percent_Identity=31.2292358803987, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87082281, Length=275, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788484, Length=266, Percent_Identity=24.4360902255639, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 34193; Mature: 34193

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTAL
CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHH
MSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWK
HHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCCEEE
LNIDDVDFARFSQAKLLSLASIFNSPLLDGRALTEIFTQAKTRQMIICADMIKPRLNETL
EECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCEEEEEHHHHHHHHHHHH
NDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
HHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCC
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSIGATTGV
EEECCCHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHEECCCCCC
KNRKLVEQLLEEYEG
CHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTAL
CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHH
MSRIGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWK
HHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEEEECCCEEEEECCCCCEEE
LNIDDVDFARFSQAKLLSLASIFNSPLLDGRALTEIFTQAKTRQMIICADMIKPRLNETL
EECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCEEEEEHHHHHHHHHHHH
NDICEALSYVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
HHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCC
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSIGATTGV
EEECCCHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHEECCCCCC
KNRKLVEQLLEEYEG
CHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]