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The map label for this gene is ydjZ [H]

Identifier: 218689693

GI number: 218689693

Start: 1910779

End: 1911486

Strand: Direct

Name: ydjZ [H]

Synonym: ECED1_1954

Alternate gene names: 218689693

Gene position: 1910779-1911486 (Clockwise)

Preceding gene: 218689692

Following gene: 218689694

Centisome position: 36.68

GC content: 50.85

Gene sequence:

>708_bases
ATGATGAAGATGCAATCGCGTAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCTGTGCTGCTGGCATG
GGCGCTGCTTCCCGGCGTCCATGAGTTTATCAATCGCAGCATTGCGGCGTTTGCCGCCGTGGACCAACAGGGTATAGAAC
GCTTTATTCAGTCTTACGGCGCACTAGCGGCAGTTGTCTCGTTCTTGTTGATGATTTTACAGGCCATTGCTGCACCGCTA
CCTGCGTTTTTGATCACCTTTGCCAATGCGTCGCTGTTTGGTGCGTTCTGGGGCGGCTTACTGTCGTGGACCAGTTCGAT
GGCCGGCGCGGCGCTGTGCTTTTTTATCGCCAGAGTGATGGGCCGCGAAGTGGTGGAAAAATTAACCGGCAAAACCGTAC
TTGACAGTATGGACGGCTTTTTCACTCGTTACGGCAAACACACCATCCTGGTATGTCGGTTATTGCCTTTTGTCCCTTTC
GATCCAATCAGCTATGCTGCCGGTTTGACTTCAATACGTTTTCGCTCGTTTTTTATCGCCACCGGGCTTGGTCAATTACC
GGCGACTATTGTTTATTCCTGGGCGGGCAGCATGTTAACAGGCGGTACTTTCTGGTTTGTCACCGGACTGTTTATTCTGT
TTGCCCTGACCGTGGTGATTTTTATGGCGAAGAAAATATGGCTTGAGCGCCAGAAGAGGAATGCCTGA

Upstream 100 bases:

>100_bases
CGCGGCGAAGTGAAATTCAAAGGCAATGCCTCAGTTCTCCCGGCGGATAACACGCTGGCAACGGTTACCTTTAAAATCAC
CGAATAAAGCAGGATAACGG

Downstream 100 bases:

>100_bases
TGGGTTTACCGCCGCTTAGCAAAATTCCTTTCATTTTACGTCCGCAGGCGTGGCTGCATCGTCGCCATTACGGCGAGGTG
CTAAGCCCCATTCGCTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MMKMQSRKIWYYRITLIILLFAVLLAWALLPGVHEFINRSIAAFAAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPL
PAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPF
DPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTVVIFMAKKIWLERQKRNA

Sequences:

>Translated_235_residues
MMKMQSRKIWYYRITLIILLFAVLLAWALLPGVHEFINRSIAAFAAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPL
PAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPF
DPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTVVIFMAKKIWLERQKRNA
>Mature_235_residues
MMKMQSRKIWYYRITLIILLFAVLLAWALLPGVHEFINRSIAAFAAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPL
PAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPF
DPISYAAGLTSIRFRSFFIATGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTVVIFMAKKIWLERQKRNA

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=235, Percent_Identity=98.7234042553192, Blast_Score=464, Evalue=1e-132,
Organism=Escherichia coli, GI87081964, Length=197, Percent_Identity=26.3959390862944, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 26140; Mature: 26140

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKMQSRKIWYYRITLIILLFAVLLAWALLPGVHEFINRSIAAFAAVDQQGIERFIQSYG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGLTSIRFRSFFIA
HHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
TGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTVVIFMAKKIWLERQKRNA
HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMKMQSRKIWYYRITLIILLFAVLLAWALLPGVHEFINRSIAAFAAVDQQGIERFIQSYG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLSWTSSMAGAALCFFIARVM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPFDPISYAAGLTSIRFRSFFIA
HHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
TGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTVVIFMAKKIWLERQKRNA
HCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]