Click here to switch to the map view.

The map label for this gene is osmE [H]

Identifier: 218689680

GI number: 218689680

Start: 1897890

End: 1898228

Strand: Reverse

Name: osmE [H]

Synonym: ECED1_1941

Alternate gene names: 218689680

Gene position: 1898228-1897890 (Counterclockwise)

Preceding gene: 218689683

Following gene: 218689679

Centisome position: 36.44

GC content: 48.97

Gene sequence:

>339_bases
ATGAACAAGAATATGGCAGGAATTCTGAGTGCAGCGGCGGTATTAACCATGCTGGCGGGTTGTACGGCTTATGATCGTAC
CAAAGACCAGTTTGTACAGCCTGTGGTGAAAGACGTCAAAAAAGGCATGAGCCGGGCGCAGGTTGCACAAATTGCGGGTA
AACCTTCGTCTGAAGTGAGCATGATCCATGCTCGTGGTACTTGCCAGACCTACATCCTGGGTCAACGTGATGGTAAAGCA
GAAACCTACTTTGTCGCGTTAGATGATACCGGACATGTCATCAACTCCGGTTATCAGACCTGTGCTGAATACGACACTGA
TCCACAGGCTACGAAGTAA

Upstream 100 bases:

>100_bases
AGGAATCCTCTGAAAGCGGAGCCGTTTCGTTCACGGGCTTGAAAAAGCGCCCAATGTATTCCAGGCTTATCTAACACGCT
GATAAACAAGAGGACGGAAT

Downstream 100 bases:

>100_bases
TCACTTCGCCTGAAAGCTTGAGTAACAACGGAAACCGGCCATTGCGCCGGTTTTTTTTGGCCTGTGTTCTTAATTATCTT
CGCGAATTATTTGCCCGAAA

Product: DNA-binding transcriptional activator OsmE

Products: NA

Alternate protein names: Activator of ntr-like gene protein [H]

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMSRAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKA
ETYFVALDDTGHVINSGYQTCAEYDTDPQATK

Sequences:

>Translated_112_residues
MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMSRAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKA
ETYFVALDDTGHVINSGYQTCAEYDTDPQATK
>Mature_112_residues
MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMSRAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKA
ETYFVALDDTGHVINSGYQTCAEYDTDPQATK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788035, Length=112, Percent_Identity=99.1071428571429, Blast_Score=232, Evalue=6e-63,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 12051; Mature: 12051

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMSRAQVAQIAGKPSSEVS
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
MIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCAEYDTDPQATK
EEECCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMSRAQVAQIAGKPSSEVS
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
MIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCAEYDTDPQATK
EEECCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]