Click here to switch to the map view.

The map label for this gene is ydiE [H]

Identifier: 218689650

GI number: 218689650

Start: 1867710

End: 1867901

Strand: Direct

Name: ydiE [H]

Synonym: ECED1_1907

Alternate gene names: 218689650

Gene position: 1867710-1867901 (Clockwise)

Preceding gene: 218689649

Following gene: 218689665

Centisome position: 35.85

GC content: 52.08

Gene sequence:

>192_bases
ATGCGTTATACGGATAGCAGAAAACTCACGCCTGAAACGGATGCCAGTCACAAGACCGCTTCCCCGCAGCCCATCCGGCG
AATTACCAGCCAGACACTGTTAGGTCCGGATGGCAAACTGATTATCGATCATGACGGGCAAGAATATCTGCTCCGTAAAA
CTCAGGCTGGCAAGCTGCTGTTGACCAAGTAG

Upstream 100 bases:

>100_bases
TCTGCGCAACTTGTTGTCTTCTCAACAAATTACTACTTGCTCTGGCCCGCCATAATATTGATAATAAGAATCATTGTTAT
ATAAATTATTATTAATTTTT

Downstream 100 bases:

>100_bases
CCTTTAACTCGAGCAGCTGACTTCCAGCCGTTTACCCCAGTCGGGTGGACGACTGACATAGTCATCATCTCTGTCGCTGA
AAGGATTTCGCAACGCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MRYTDSRKLTPETDASHKTASPQPIRRITSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK

Sequences:

>Translated_63_residues
MRYTDSRKLTPETDASHKTASPQPIRRITSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK
>Mature_63_residues
MRYTDSRKLTPETDASHKTASPQPIRRITSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLLLTK

Specific function: Unknown

COG id: COG4256

COG function: function code P; Hemin uptake protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Y.enterocolitica hemP [H]

Homologues:

Organism=Escherichia coli, GI1787998, Length=63, Percent_Identity=96.8253968253968, Blast_Score=125, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016060
- InterPro:   IPR019600 [H]

Pfam domain/function: PF10636 hemP [H]

EC number: NA

Molecular weight: Translated: 7104; Mature: 7104

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYTDSRKLTPETDASHKTASPQPIRRITSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEECCCCCEEEECCCHHEEEECCCCCEEE
LTK
ECC
>Mature Secondary Structure
MRYTDSRKLTPETDASHKTASPQPIRRITSQTLLGPDGKLIIDHDGQEYLLRKTQAGKLL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCEECCCCCEEEECCCHHEEEECCCCCEEE
LTK
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]