| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218689534
Identifier: 218689534
GI number: 218689534
Start: 1749234
End: 1750982
Strand: Reverse
Name: 218689534
Synonym: ECED1_1786
Alternate gene names: NA
Gene position: 1750982-1749234 (Counterclockwise)
Preceding gene: 218689535
Following gene: 218689533
Centisome position: 33.61
GC content: 52.6
Gene sequence:
>1749_bases ATGAAACTGGCACCGAACGTAAAAAAACAGCCACGCGGAATAAAACACAAAGACACAGAGGTAATTATTTTCGCGGGTAG TGATGCCTGGTCGCACGCGAAACAATGGCAGGAGCAGGATGGCCCCGCATCCGGCGATAATGTTCCGCCTGTGTGGCTTG GGCCAAATCAGCTTGCCGAACTTGATGCGCTGAAAATTGTTCCGGATGGAAAAAAACGCGTAAGGCTGTACCAGGCAGGA GAACTGGACTTGGTGGAGACCAAAAAGATTGGTCAGAAGCTGGCGGCGGCAGATATTCAGGACACAAATTTTTACCCCGA AGGAATGCACGCCCAGAAGTGTGAAAACTGGCGGCGCTATCTGAATGCTGAGCGTGAAAATATTGCCGCAGGGCTTACCA TGCCGGAGCAGAAAAATACGCAACTGGCACAAATGGCAGACAGTGAGCGCGCCCAGCTGCTTGCTGGTCGATTTGATGGC GTTTGCGTACATCCTGAAAGTGAAATAGTTCACGTATGGCGCGGCGGGGTATGGTGTCCGGTCAGCACAATGGAGCTGAG CCGCGAAATGGTGGTGATCTATTCAGAGCACAGGGCCACTTTCAGCAAGCGCGTAATCAATAACGCCGTGGAAGCGTTAA AAGTTATTGCCGAACCAATGGGGGAGCCATCAGGCGATTTGCTGCCGTTCGCCAATGGTGTGCTTGACCTGAAAGCGGGG GAATTTTCCCCGCACACGCCGGAGAACTGGATCACCACGCACAACGGCATTGAGTACACGCCACCAGCACCAGGGGAGAA CATTCGCGACAACGCGCCAAACTTTCATAAATGGCTTGAGCACGCAGCCGGAAAAGACCCGCGAAAGATGATGCGTATAT GTGCCGCGCTGTACATGATTATGGCGAACCGGTACGACTGGCAGATGTTTATTGAGGCCACCGGAGAGGGCGGTAGCGGT AAAAGTACATTCACACACATAGCCAGCCTTCTGGCAGGGAAACAGAACACGGTAAGCGCTGAAATGACATCGCTTGATGA TGCTGGTGGACGTGCGCAGGTTGTCGGGAGTCGTCTTATCGTCCTGGCTGACCAGCCGAAATATACAGGCGAAGGAACGG GCATCAAGAAAATCACAGGCGGCGACCCCGTGGAAATTAACCCGAAATATGAAAAGCGTTTCACGGCGGTAATCAGGGCG GTGGTGCTGGCTACCAACAATAACCCGATGATATTCACCGAGCGGGCCGGAGGTGTGTCACGCCGTCGGGTGATTTTCCG GTTCGACAACATTGTAAGGGAGGACGAAAAAGACAAGGATTTGCCGGAGAAGGTCGCGGCTGAAATCCCCGTAATTATCC GTCGCTTGCTGGCTAATTTTGCCGACCCTGAAAAGGCACGGGCTTTATTACTGGAACAGCGCGACGGTGATGAAGCACTG GCGATAAAGCAACAGACGGATCCGGTTATTGAGTTTTGCCAGTTCCTGAATTTTCTGGAGGAAGCGCGCGGCCTGATGAT GGGTGGCGGTGGCGATTCCGTGAAGTACACGACCAGAAACAGCCTTTACCGCGTCTATCTGGCGTTTATGGCATACGCAG GCAGGAGCAAACCGCTAAACGTGGCTGAGTTCAGCAAGGCCATGAAGCCAGCGGCAAAAGTTTACGGACATGAATATATT ACGCGGAGAGTTAAGGGAGTAACGCAGACCAACGCAATTACAACTGATGATTGTGACGCGTTTTTATAA
Upstream 100 bases:
>100_bases TGGTACAGGCAGCGCCCCGCAGTAAACCAACCAGCAGGGAGAAAGCACGCGCCAATATTCAGGAAATAAAAAAGATGCTT AACGTATTCAGGGGTAAGAA
Downstream 100 bases:
>100_bases TTTTTTGTAAAAGCCCTCTACCCCATCTACCTGAATGAAATAAACGCATATTATTCAACATGATAAGTGGGTAGAGGGCT AGGTAGAAGGCTAATAAAAC
Product: nucleic acid independent nucleoside triphosphatase; phage DNA primase
Products: NA
Alternate protein names: DNA Primase; Bacteriophage P4 DNA Primase; Primase; Plasmid And Phage DNA Primase; P4-Specific DNA Primase; DNA Primase Prophage; D5 N Like Family; Phage Primase; P4 Family Phage/Plasmid Primase; Phage DNA Primase; Phage/Plasmid Primase; Primase Superantigen-Encoding Pathogenicity Islands SaPI; Phage DNA Primase-Like Protein; Helicase Superfamily Protein; Nucleic Acid Independent Nucleoside Triphosphatase; Nucleoside Triphosphatase; Bacteriophage Protein; Alpha Replication I; Nucleoside Triphosphatase D5 Family
Number of amino acids: Translated: 582; Mature: 582
Protein sequence:
>582_residues MKLAPNVKKQPRGIKHKDTEVIIFAGSDAWSHAKQWQEQDGPASGDNVPPVWLGPNQLAELDALKIVPDGKKRVRLYQAG ELDLVETKKIGQKLAAADIQDTNFYPEGMHAQKCENWRRYLNAERENIAAGLTMPEQKNTQLAQMADSERAQLLAGRFDG VCVHPESEIVHVWRGGVWCPVSTMELSREMVVIYSEHRATFSKRVINNAVEALKVIAEPMGEPSGDLLPFANGVLDLKAG EFSPHTPENWITTHNGIEYTPPAPGENIRDNAPNFHKWLEHAAGKDPRKMMRICAALYMIMANRYDWQMFIEATGEGGSG KSTFTHIASLLAGKQNTVSAEMTSLDDAGGRAQVVGSRLIVLADQPKYTGEGTGIKKITGGDPVEINPKYEKRFTAVIRA VVLATNNNPMIFTERAGGVSRRRVIFRFDNIVREDEKDKDLPEKVAAEIPVIIRRLLANFADPEKARALLLEQRDGDEAL AIKQQTDPVIEFCQFLNFLEEARGLMMGGGGDSVKYTTRNSLYRVYLAFMAYAGRSKPLNVAEFSKAMKPAAKVYGHEYI TRRVKGVTQTNAITTDDCDAFL
Sequences:
>Translated_582_residues MKLAPNVKKQPRGIKHKDTEVIIFAGSDAWSHAKQWQEQDGPASGDNVPPVWLGPNQLAELDALKIVPDGKKRVRLYQAG ELDLVETKKIGQKLAAADIQDTNFYPEGMHAQKCENWRRYLNAERENIAAGLTMPEQKNTQLAQMADSERAQLLAGRFDG VCVHPESEIVHVWRGGVWCPVSTMELSREMVVIYSEHRATFSKRVINNAVEALKVIAEPMGEPSGDLLPFANGVLDLKAG EFSPHTPENWITTHNGIEYTPPAPGENIRDNAPNFHKWLEHAAGKDPRKMMRICAALYMIMANRYDWQMFIEATGEGGSG KSTFTHIASLLAGKQNTVSAEMTSLDDAGGRAQVVGSRLIVLADQPKYTGEGTGIKKITGGDPVEINPKYEKRFTAVIRA VVLATNNNPMIFTERAGGVSRRRVIFRFDNIVREDEKDKDLPEKVAAEIPVIIRRLLANFADPEKARALLLEQRDGDEAL AIKQQTDPVIEFCQFLNFLEEARGLMMGGGGDSVKYTTRNSLYRVYLAFMAYAGRSKPLNVAEFSKAMKPAAKVYGHEYI TRRVKGVTQTNAITTDDCDAFL >Mature_582_residues MKLAPNVKKQPRGIKHKDTEVIIFAGSDAWSHAKQWQEQDGPASGDNVPPVWLGPNQLAELDALKIVPDGKKRVRLYQAG ELDLVETKKIGQKLAAADIQDTNFYPEGMHAQKCENWRRYLNAERENIAAGLTMPEQKNTQLAQMADSERAQLLAGRFDG VCVHPESEIVHVWRGGVWCPVSTMELSREMVVIYSEHRATFSKRVINNAVEALKVIAEPMGEPSGDLLPFANGVLDLKAG EFSPHTPENWITTHNGIEYTPPAPGENIRDNAPNFHKWLEHAAGKDPRKMMRICAALYMIMANRYDWQMFIEATGEGGSG KSTFTHIASLLAGKQNTVSAEMTSLDDAGGRAQVVGSRLIVLADQPKYTGEGTGIKKITGGDPVEINPKYEKRFTAVIRA VVLATNNNPMIFTERAGGVSRRRVIFRFDNIVREDEKDKDLPEKVAAEIPVIIRRLLANFADPEKARALLLEQRDGDEAL AIKQQTDPVIEFCQFLNFLEEARGLMMGGGGDSVKYTTRNSLYRVYLAFMAYAGRSKPLNVAEFSKAMKPAAKVYGHEYI TRRVKGVTQTNAITTDDCDAFL
Specific function: Unknown
COG id: COG3378
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64670; Mature: 64670
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAPNVKKQPRGIKHKDTEVIIFAGSDAWSHAKQWQEQDGPASGDNVPPVWLGPNQLAE CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHH LDALKIVPDGKKRVRLYQAGELDLVETKKIGQKLAAADIQDTNFYPEGMHAQKCENWRRY CCEEEECCCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH LNAERENIAAGLTMPEQKNTQLAQMADSERAQLLAGRFDGVCVHPESEIVHVWRGGVWCP HCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCEECC VSTMELSREMVVIYSEHRATFSKRVINNAVEALKVIAEPMGEPSGDLLPFANGVLDLKAG CHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC EFSPHTPENWITTHNGIEYTPPAPGENIRDNAPNFHKWLEHAAGKDPRKMMRICAALYMI CCCCCCCCCCEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH MANRYDWQMFIEATGEGGSGKSTFTHIASLLAGKQNTVSAEMTSLDDAGGRAQVVGSRLI HHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEECCEEE VLADQPKYTGEGTGIKKITGGDPVEINPKYEKRFTAVIRAVVLATNNNPMIFTERAGGVS EEECCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHEEECCCCEEEEECCCCCC RRRVIFRFDNIVREDEKDKDLPEKVAAEIPVIIRRLLANFADPEKARALLLEQRDGDEAL HHEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEE AIKQQTDPVIEFCQFLNFLEEARGLMMGGGGDSVKYTTRNSLYRVYLAFMAYAGRSKPLN EEECCCCHHHHHHHHHHHHHHHCCEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCC VAEFSKAMKPAAKVYGHEYITRRVKGVTQTNAITTDDCDAFL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC >Mature Secondary Structure MKLAPNVKKQPRGIKHKDTEVIIFAGSDAWSHAKQWQEQDGPASGDNVPPVWLGPNQLAE CCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHH LDALKIVPDGKKRVRLYQAGELDLVETKKIGQKLAAADIQDTNFYPEGMHAQKCENWRRY CCEEEECCCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH LNAERENIAAGLTMPEQKNTQLAQMADSERAQLLAGRFDGVCVHPESEIVHVWRGGVWCP HCCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCEECC VSTMELSREMVVIYSEHRATFSKRVINNAVEALKVIAEPMGEPSGDLLPFANGVLDLKAG CHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECC EFSPHTPENWITTHNGIEYTPPAPGENIRDNAPNFHKWLEHAAGKDPRKMMRICAALYMI CCCCCCCCCCEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHH MANRYDWQMFIEATGEGGSGKSTFTHIASLLAGKQNTVSAEMTSLDDAGGRAQVVGSRLI HHCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCEEEECCEEE VLADQPKYTGEGTGIKKITGGDPVEINPKYEKRFTAVIRAVVLATNNNPMIFTERAGGVS EEECCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHEEECCCCEEEEECCCCCC RRRVIFRFDNIVREDEKDKDLPEKVAAEIPVIIRRLLANFADPEKARALLLEQRDGDEAL HHEEEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEE AIKQQTDPVIEFCQFLNFLEEARGLMMGGGGDSVKYTTRNSLYRVYLAFMAYAGRSKPLN EEECCCCHHHHHHHHHHHHHHHCCEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCC VAEFSKAMKPAAKVYGHEYITRRVKGVTQTNAITTDDCDAFL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA