| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218689486
Identifier: 218689486
GI number: 218689486
Start: 1707683
End: 1708369
Strand: Reverse
Name: 218689486
Synonym: ECED1_1731
Alternate gene names: NA
Gene position: 1708369-1707683 (Counterclockwise)
Preceding gene: 218689487
Following gene: 218689485
Centisome position: 32.79
GC content: 47.31
Gene sequence:
>687_bases ATGACCCCAATAAAAATATTTATGACTATTGCTGATTTCAAACGGCCTAAATTGGAACTCCCAAACGGGGCAAACAAACT ACTACTGCACTCTTGCTGTGCTCCATGTTCCGGTGAAGTGATGGAGGCGCTTCAGGCCTCGGGAATCGACTACACCATCT TTTTCTACAACCCGAACATTCATCCTCAGAAAGAGTATTTAATTCGTAAGGATGAAAATATTCGCTTTGCTGAACAACAC GGCGTGCCGTTTATCGATGCTGATTACGACACCGACAACTGGTTTGAACGTGCCAAAGGAATGGAATGGGAGCCTGAGAG GGGGATCCGTTGTACCATGTGTTTTGACATGCGTTTTGAGCGGACAGCGTTGTACGCTGCTGAAAATGGTTTCAGTGTGA TCAGCAGTTCACTGGGCATTTCACGCTGGAAAAATATGCAGCAGGTTAACGAGTGTGGGCGGCGAGCTGTTGCGCATTAT CCGGGTATGGTGTACTGGGATTATAACTGGCGCAAGCAGGGCGGCTCGTCCCGTATGATTGAAATCAGCAAGCGCGAAAA ATTCTATCAGCAGGAATATTGTGGCTGTGTGTATTCTCTGCGCGATACCAATCTACACCGCAAATCTCAGGGACGCCCTC TTATCAAAATTGGCCAACTCCACTACGGAAAAGAAGAGAAGGAGTGA
Upstream 100 bases:
>100_bases GCCAGCGTGGTTGTCCGCTTTGCGTCAAAACCAGATATTACCAGATTTAGACATATATTCCCGATAGCCCTGCTCTGATG CTACACTCTGTGCTATTTTC
Downstream 100 bases:
>100_bases TTTTATGGATCACCTTTCTGATTGATTTCATATTGGCGAGGTGACGTGAGTTAAGTAGAATTGCTGCGGGTGCTTGAGGC TATCTGCCTCGGGCATGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTPIKIFMTIADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNIHPQKEYLIRKDENIRFAEQH GVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNECGRRAVAHY PGMVYWDYNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE
Sequences:
>Translated_228_residues MTPIKIFMTIADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNIHPQKEYLIRKDENIRFAEQH GVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNECGRRAVAHY PGMVYWDYNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE >Mature_227_residues TPIKIFMTIADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNIHPQKEYLIRKDENIRFAEQHG VPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNECGRRAVAHYP GMVYWDYNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE
Specific function: Unknown
COG id: COG1636
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003828 [H]
Pfam domain/function: PF02677 DUF208 [H]
EC number: NA
Molecular weight: Translated: 26697; Mature: 26566
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIKIFMTIADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNI CCCEEEEEEEHHCCCCCEECCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCC HPQKEYLIRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFE CCCHHHEEECCCCCEEHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCC RTALYAAENGFSVISSSLGISRWKNMQQVNECGRRAVAHYPGMVYWDYNWRKQGGSSRMI CEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEE EISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE EEHHHHHHHHHHHHCEEEEECCCCCCHHCCCCCEEEECCEECCCCCCC >Mature Secondary Structure TPIKIFMTIADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDYTIFFYNPNI CCEEEEEEEHHCCCCCEECCCCCCHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEECCCC HPQKEYLIRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGIRCTMCFDMRFE CCCHHHEEECCCCCEEHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCEEEEEECCCCC RTALYAAENGFSVISSSLGISRWKNMQQVNECGRRAVAHYPGMVYWDYNWRKQGGSSRMI CEEEEECCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEE EISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKEEKE EEHHHHHHHHHHHHCEEEEECCCCCCHHCCCCCEEEECCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]