| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218689464
Identifier: 218689464
GI number: 218689464
Start: 1693744
End: 1694109
Strand: Reverse
Name: 218689464
Synonym: ECED1_1707
Alternate gene names: NA
Gene position: 1694109-1693744 (Counterclockwise)
Preceding gene: 218689466
Following gene: 218689463
Centisome position: 32.52
GC content: 55.74
Gene sequence:
>366_bases ATGGCTGAGCTTCGTACACTCCAGAGCAGAATCAAAACACTGAATACCCGACGGGTGAATATTCTGAAGGGGGAACAGCG TCGTGTCAGTGGCAGTGCACGTGTTTCCCTCAAGCGTCATATCTGGCTGAGGGACGCCGGGCAGTGCTGTCTCTGTGGGC GTGTGGTTGACCTCTGTGACAGTGAACTCGATCACCGAATTGCACTTCAGTTCGGTGGTGGTAATGAGGAGACGAATCTC TGGACGCTCTGTACTGAATGTCATCGCCAGAAGTCAGCCAGTGAAGCGGCGAGTGGTATGCCGGACCCGACGTTGCCGGA AGTGTCCGGAGGTCGTGGCAGGGCAGACGATATCATCGGACTGTGA
Upstream 100 bases:
>100_bases TGATTGGGGAAACGGATATTGCGGGTTGTGGTTCTGCGGGTCCGGTTTTTCGATGACATATTTATTTCCTTTACTGATTG CCATATGACGGGGATTTTAC
Downstream 100 bases:
>100_bases CCCGCCCTGGGGGGGGATCATCCGGCGATAAAAACGATCGTCCCGGACACCGCGCCCCGTCTCACGCAGAGAAAAAATTC CCGTTTCAGGCCAGTTAACA
Product: putative endonuclease from phage origin
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MAELRTLQSRIKTLNTRRVNILKGEQRRVSGSARVSLKRHIWLRDAGQCCLCGRVVDLCDSELDHRIALQFGGGNEETNL WTLCTECHRQKSASEAASGMPDPTLPEVSGGRGRADDIIGL
Sequences:
>Translated_121_residues MAELRTLQSRIKTLNTRRVNILKGEQRRVSGSARVSLKRHIWLRDAGQCCLCGRVVDLCDSELDHRIALQFGGGNEETNL WTLCTECHRQKSASEAASGMPDPTLPEVSGGRGRADDIIGL >Mature_120_residues AELRTLQSRIKTLNTRRVNILKGEQRRVSGSARVSLKRHIWLRDAGQCCLCGRVVDLCDSELDHRIALQFGGGNEETNLW TLCTECHRQKSASEAASGMPDPTLPEVSGGRGRADDIIGL
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13359; Mature: 13228
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELRTLQSRIKTLNTRRVNILKGEQRRVSGSARVSLKRHIWLRDAGQCCLCGRVVDLCD CCHHHHHHHHHHHHCCCEEEEECCCCHHCCCCCEEEEEEEEEECCCCCEEHHHHHHHHHC SELDHRIALQFGGGNEETNLWTLCTECHRQKSASEAASGMPDPTLPEVSGGRGRADDIIG CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC L C >Mature Secondary Structure AELRTLQSRIKTLNTRRVNILKGEQRRVSGSARVSLKRHIWLRDAGQCCLCGRVVDLCD CHHHHHHHHHHHHCCCEEEEECCCCHHCCCCCEEEEEEEEEECCCCCEEHHHHHHHHHC SELDHRIALQFGGGNEETNLWTLCTECHRQKSASEAASGMPDPTLPEVSGGRGRADDIIG CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA