| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
Click here to switch to the map view.
The map label for this gene is 218689456
Identifier: 218689456
GI number: 218689456
Start: 1685753
End: 1686103
Strand: Reverse
Name: 218689456
Synonym: ECED1_1699
Alternate gene names: NA
Gene position: 1686103-1685753 (Counterclockwise)
Preceding gene: 218689457
Following gene: 218689455
Centisome position: 32.37
GC content: 59.26
Gene sequence:
>351_bases ATGGCAATTTCTGCAGGGCGTCTGACACAGATGATAAGCATTCTGAACCCGGTGTTAACCCGTAATGCTGCCGGAGAAAT GACGGAAGAATGGGTGTCATGCGGGAAAATTCATGCGGATATCCGGGGCAGGAGCAGCCGGGAGCGGATGCAGTCCGGTG CGGAAATGGCGCAGGCGGAAATCCGCATCTGGGTGCGCGGTCAGTCCGGTCGGGAAATCACGGCGGCGTCACGACTTCAT GTGCTGAGTGGTCCCTGGCGTGACTGTATCCTGAATGTTGTCGGGGTGCCCGTGCCGGATGCGACCGGCGGGCGCCTGGA AATTCTCTGTCGGCTGGGAGGGGAAAAATGA
Upstream 100 bases:
>100_bases TCTTGCTGAGCGGGAAGACCTCGTGCAGGGGGAACTGCCGTTTTCTGTGTCCGTGCTGATTTACGATTTGCGTTGCCCGA CGGTGTTATGAGGAGGGGGA
Downstream 100 bases:
>100_bases TCGAAACCCTGCTGGATTTTTCGGGACTTGAAGAAATAAGCCGTGATTTGCAGCTTCTGAGTGGTGCAGAAAACAACCGG GTACTGCGTGAGGCAACCCG
Product: putative head-tail adaptor in prophage
Products: NA
Alternate protein names: Phage Head-Tail Adaptor; Bacteriophage Head-Tail Adaptor
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MAISAGRLTQMISILNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAEIRIWVRGQSGREITAASRLH VLSGPWRDCILNVVGVPVPDATGGRLEILCRLGGEK
Sequences:
>Translated_116_residues MAISAGRLTQMISILNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAEIRIWVRGQSGREITAASRLH VLSGPWRDCILNVVGVPVPDATGGRLEILCRLGGEK >Mature_115_residues AISAGRLTQMISILNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAEIRIWVRGQSGREITAASRLHV LSGPWRDCILNVVGVPVPDATGGRLEILCRLGGEK
Specific function: Unknown
COG id: COG5614
COG function: function code R; Bacteriophage head-tail adaptor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12610; Mature: 12479
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISAGRLTQMISILNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAE CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEE IRIWVRGQSGREITAASRLHVLSGPWRDCILNVVGVPVPDATGGRLEILCRLGGEK EEEEEECCCCCEEHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC >Mature Secondary Structure AISAGRLTQMISILNPVLTRNAAGEMTEEWVSCGKIHADIRGRSSRERMQSGAEMAQAE CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEE IRIWVRGQSGREITAASRLHVLSGPWRDCILNVVGVPVPDATGGRLEILCRLGGEK EEEEEECCCCCEEHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA