| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218689441
Identifier: 218689441
GI number: 218689441
Start: 1673671
End: 1674351
Strand: Reverse
Name: 218689441
Synonym: ECED1_1683
Alternate gene names: NA
Gene position: 1674351-1673671 (Counterclockwise)
Preceding gene: 218689442
Following gene: 218689440
Centisome position: 32.14
GC content: 58.59
Gene sequence:
>681_bases ATGGCAACGACGAACGCATTCTGTCTGGCGTCACCGCCACTGGCACACATCTGCCTTCACGGGGATTTACAACGATTTGG CCGCCGCTTCAGCCTGTATGTGAACACGGCGGCGGAAGCCATCCGCGCCCTGTCGCAGCAGGTGCCGGGATTCCGCCGTC AGATGAACGAAGGCTGGTACCAGATACGCATTGCCGGTGAGGATACGGCACCGGAGGCGGTGTATGCCCGCCTTCACGAA CCACTGGGTGAGGGAACGGTTATCCATATTGTGCCGCGACTGGCCGGAGCCGGAAAGGGCGGACTACAGATTGTGCTGGG GGCAGCTGCCATTGTGGGGTCTTTCTTCACGGCCGGGGCATCAATGGCGTTATGGGGTTCAGCCCTGGCAGCCGGTGGTT TTTCTGCCACCACGATGCTGTTTTCACTGGGTGCCAGCATGATTCTGGGTGGTGTGGCGCAGATGCTTGCCCCGAAGGCA AAGACACCGGATTACCGGGCAACGGATAACGGTAAACAGAACACGTATTTTTCCTCACTGGATAACATGATTGCCCAGGG CAACCCGATGCCGGTGCCTTACGGGGAAATGCTGGTTGGTTCACGACGTATCTCTCAGGACATCAGCACCCGTGATGAAG GCGGGGGCGGAAAGGTGGTGGTTATTGGTCGACAGGGATAA
Upstream 100 bases:
>100_bases GCGCATCGGTGGCTAATCATGCCGCCATTTACTGCGGCAACGGTGAACTGCTTCACCATCTGCCTGAACAACTGAGTAAA CGGGAGAGGTATTCCGAAAA
Downstream 100 bases:
>100_bases AACATAAAAAAATCCCGCAGTGATCGCGGAGCTGCGGGGACAGACAAATGAAGATTAATGTTAAGGAGTTGTTTTTGTTA CTCGGGCAAAAAAAACTAAC
Product: tail assembly protein I
Products: NA
Alternate protein names: Lambda Tail Assembly I; Bacteriophage Lambda Tail Assembly Protein I; Bacteriophage Lambda Tail Assembly I; Tail Assembly Protein I; Bacteriophage Tail Protein; Tail Assembly Protein I Prophage; Bacteriophage Protein; Tail Assembly Protein; Phage-Related Protein Tail Component; Phage Tail Component; Tail Assembly Protein I-Like; Partial Phage Tail R; Prophage LambdaSo Tail Assembly Protein I; Phage Tail Protein; Gp63 Phage Protein; Phage Tail Assembly Protein I
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MATTNAFCLASPPLAHICLHGDLQRFGRRFSLYVNTAAEAIRALSQQVPGFRRQMNEGWYQIRIAGEDTAPEAVYARLHE PLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKA KTPDYRATDNGKQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG
Sequences:
>Translated_226_residues MATTNAFCLASPPLAHICLHGDLQRFGRRFSLYVNTAAEAIRALSQQVPGFRRQMNEGWYQIRIAGEDTAPEAVYARLHE PLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKA KTPDYRATDNGKQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG >Mature_225_residues ATTNAFCLASPPLAHICLHGDLQRFGRRFSLYVNTAAEAIRALSQQVPGFRRQMNEGWYQIRIAGEDTAPEAVYARLHEP LGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKAK TPDYRATDNGKQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG
Specific function: Unknown
COG id: COG4723
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23759; Mature: 23627
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTNAFCLASPPLAHICLHGDLQRFGRRFSLYVNTAAEAIRALSQQVPGFRRQMNEGWY CCCCCCEEECCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHCCHHHHHHCCCEE QIRIAGEDTAPEAVYARLHEPLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGA EEEECCCCCCHHHHHHHHHHCCCCCCEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHCCC SMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKAKTPDYRATDNGKQNTYFSSL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH DNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC >Mature Secondary Structure ATTNAFCLASPPLAHICLHGDLQRFGRRFSLYVNTAAEAIRALSQQVPGFRRQMNEGWY CCCCCEEECCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHCCHHHHHHCCCEE QIRIAGEDTAPEAVYARLHEPLGEGTVIHIVPRLAGAGKGGLQIVLGAAAIVGSFFTAGA EEEECCCCCCHHHHHHHHHHCCCCCCEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHCCC SMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKAKTPDYRATDNGKQNTYFSSL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH DNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGKVVVIGRQG HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA