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The map label for this gene is ycjQ [H]

Identifier: 218689303

GI number: 218689303

Start: 1493667

End: 1494719

Strand: Direct

Name: ycjQ [H]

Synonym: ECED1_1521

Alternate gene names: 218689303

Gene position: 1493667-1494719 (Clockwise)

Preceding gene: 218689302

Following gene: 218689304

Centisome position: 28.67

GC content: 55.27

Gene sequence:

>1053_bases
ATGAAAAAGTTAGTAGCCACAGCACCGCGCGTTGCTGCGCTGGTTGAGTATGAAGATCGGGCGATTTCAGCCAATGAAGT
GAAGATCCGCGTGCGATTCGGCGCACCGAAGCATGGGACGGAAGTGGTCGATTTCCGCGCTGCCAGTCCGTTTATCGATG
AAGACTTTAACGGCGAATGGCAGATGTTCACCCCGCGTCCAGCAGATGCGCCGCGCGGCATTGAGTTTGGCAAATTCCAG
CTTGGCAACATGGTGGTTGGCGACATTATCGAGTGCGGCAGCGACGTTACCGACTACGCGGTGGGCGACAGCGTATGCGG
CTACGGCCCGCTTTCCGAGACGGTCATCATTAACGCAGTGAATAACTACAAGCTGCGCAAAATGCCGCAAGGCAGCTCCT
GGAAAAACGCCGTCTGCTACGACCCGGCGCAGTTTGCCATGAGCGGCGTGCGCGATGCCAATGTACGCGTAGGGGATTTT
GTCGTGGTGGTCGGGCTTGGCGCGATCGGTCAAATTGCCATCCAACTGGCAAAACGCGCTGGAGCGTCGGTGGTAATTGG
AGTCGATCCTATTACCCGTCGTTGTGATATTGCCCGTCGCCACGGTGCGGATTTCTGTCTTAACCCCATTGGCGCTGACG
TAGGTAAAGAGATCAAAACGCTGACCGGCAAGCAGGGTGCCGATGTGATTATCGAAACCAGTGGCTATGCCGACGCGCTG
CAATCGGCACTCCGCGGTCTGGCCTATGGCGGCACCATCTCCTATGTCGCGTTTGCTAAACCGTTTGCCGAAGGTTTTAA
CCTCGGACGCGAAGCCCATTTCAATAACGCCAAAATTGTTTTCTCCCGTGCGTGCAGCGAGCCGAACCCGGATTATCCGC
GCTGGAGCCGTAAGCGTATTGAAGAAACCTGCTGGGAACTGCTGATGAACGGTTATCTCAATTGCGAAGATTTAATCGAT
CCGGTGGTGACCTTTGCCAACAGCCCGGAAAGCTACATGCAGTATGTCGACCAGCATCCGGAACAGAGCATCAAAATGGG
CGTCACGTTTTAA

Upstream 100 bases:

>100_bases
GGTGATTATGTATGCGCTTTCGGAACATTTTATTAAGAGTGGTTTGACCGCCGGTGGCGTGAAGGGCTAAAGCGGCCAGT
TTCTTGATAAGGAGTTTTAC

Downstream 100 bases:

>100_bases
TTCAAAGGAATGATAAAAATGAAAATCGGCACACAGAATCAGGCGTTCTTTCCGGAAAACATTCTGGAGAAATTTCGTTA
TATCAAAGAGATGGGTTTCG

Product: putative oxidoreductase, Zn-dependent and NAD(P)-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MKKLVATAPRVAALVEYEDRAISANEVKIRVRFGAPKHGTEVVDFRAASPFIDEDFNGEWQMFTPRPADAPRGIEFGKFQ
LGNMVVGDIIECGSDVTDYAVGDSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDF
VVVVGLGAIGQIAIQLAKRAGASVVIGVDPITRRCDIARRHGADFCLNPIGADVGKEIKTLTGKQGADVIIETSGYADAL
QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLID
PVVTFANSPESYMQYVDQHPEQSIKMGVTF

Sequences:

>Translated_350_residues
MKKLVATAPRVAALVEYEDRAISANEVKIRVRFGAPKHGTEVVDFRAASPFIDEDFNGEWQMFTPRPADAPRGIEFGKFQ
LGNMVVGDIIECGSDVTDYAVGDSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDF
VVVVGLGAIGQIAIQLAKRAGASVVIGVDPITRRCDIARRHGADFCLNPIGADVGKEIKTLTGKQGADVIIETSGYADAL
QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLID
PVVTFANSPESYMQYVDQHPEQSIKMGVTF
>Mature_350_residues
MKKLVATAPRVAALVEYEDRAISANEVKIRVRFGAPKHGTEVVDFRAASPFIDEDFNGEWQMFTPRPADAPRGIEFGKFQ
LGNMVVGDIIECGSDVTDYAVGDSVCGYGPLSETVIINAVNNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDF
VVVVGLGAIGQIAIQLAKRAGASVVIGVDPITRRCDIARRHGADFCLNPIGADVGKEIKTLTGKQGADVIIETSGYADAL
QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRIEETCWELLMNGYLNCEDLID
PVVTFANSPESYMQYVDQHPEQSIKMGVTF

Specific function: Unknown

COG id: COG1063

COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1787572, Length=350, Percent_Identity=98.8571428571429, Blast_Score=716, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17562876, Length=154, Percent_Identity=32.4675324675325, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323099, Length=138, Percent_Identity=31.8840579710145, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6319955, Length=216, Percent_Identity=27.3148148148148, Blast_Score=64, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6322619, Length=216, Percent_Identity=27.3148148148148, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 38210; Mature: 38210

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLVATAPRVAALVEYEDRAISANEVKIRVRFGAPKHGTEVVDFRAASPFIDEDFNGEW
CCCCHHCCCHHHHEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCE
QMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVTDYAVGDSVCGYGPLSETVIINAV
EEECCCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEEEEC
NNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDFVVVVGLGAIGQIAIQLAKRA
CCCEEEECCCCCCCCCCEEECHHHHHHHCCCCCCCEECCEEEEEECCHHHHHHHHHHHHC
GASVVIGVDPITRRCDIARRHGADFCLNPIGADVGKEIKTLTGKQGADVIIETSGYADAL
CCEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHH
QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRI
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
EETCWELLMNGYLNCEDLIDPVVTFANSPESYMQYVDQHPEQSIKMGVTF
HHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCCC
>Mature Secondary Structure
MKKLVATAPRVAALVEYEDRAISANEVKIRVRFGAPKHGTEVVDFRAASPFIDEDFNGEW
CCCCHHCCCHHHHEEECCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCE
QMFTPRPADAPRGIEFGKFQLGNMVVGDIIECGSDVTDYAVGDSVCGYGPLSETVIINAV
EEECCCCCCCCCCCCCCCEEECCCHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEEEEEC
NNYKLRKMPQGSSWKNAVCYDPAQFAMSGVRDANVRVGDFVVVVGLGAIGQIAIQLAKRA
CCCEEEECCCCCCCCCCEEECHHHHHHHCCCCCCCEECCEEEEEECCHHHHHHHHHHHHC
GASVVIGVDPITRRCDIARRHGADFCLNPIGADVGKEIKTLTGKQGADVIIETSGYADAL
CCEEEEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHH
QSALRGLAYGGTISYVAFAKPFAEGFNLGREAHFNNAKIVFSRACSEPNPDYPRWSRKRI
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHH
EETCWELLMNGYLNCEDLIDPVVTFANSPESYMQYVDQHPEQSIKMGVTF
HHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]