| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218689241
Identifier: 218689241
GI number: 218689241
Start: 1426603
End: 1426944
Strand: Direct
Name: 218689241
Synonym: ECED1_1455
Alternate gene names: NA
Gene position: 1426603-1426944 (Clockwise)
Preceding gene: 218689240
Following gene: 218689242
Centisome position: 27.38
GC content: 55.26
Gene sequence:
>342_bases GTGGCTGAGATAAAAACGCTGCATCTGGTCCCGCGTGAAGGGATGCAGGTGAGTGAGAAACCGTCGGTGGTGAGGGTCCG GTTTGGTGACGGTTATGAACAGCGCCGACCGACGGGACTGAATGCCCAACTGAAGACGTTTCAGGCGGTGTTCCGGGTGA CGGATGAGGCGACCCGGCGCTGGCTGGATGAATTTTTATCGTGGCATGGTGGTTACCGTGCCTTTTTGTGGCGACCGCCG AAACATAACCGGACGGTGAGGGTGGTGTGCCGGGAGTGGAGTATTACGGATAACGCCAGGTACAGCGATTTCAGTTGTAT GATGGAACAGGTAATAAGATAA
Upstream 100 bases:
>100_bases GGTCAGATAGGGCCGGAGGCGGCAGGCAGCCTTGTGCAGCTGATTGACCAGCGGGTGCAGGCGGTGATGCTGTCCATGCG ACGAGACGGAGGAATGCTGA
Downstream 100 bases:
>100_bases GTTTTTGAGAAAAAACCTAAAAGCATCGTTTATTAATTTGCTTGCTTGTTATTTTTGTTTTGTCTTGACATAAAGTGCTA TCAAAGTTGTTTTTTTACAT
Product: minor tail protein M
Products: NA
Alternate protein names: Phage Minor Tail Protein; Minor Tail Protein M; Gifsy-1 Prophage VmtM; Gifsy-2 Prophage Minor Tail Protein; Bacteriophage Tail Protein
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAEIKTLHLVPREGMQVSEKPSVVRVRFGDGYEQRRPTGLNAQLKTFQAVFRVTDEATRRWLDEFLSWHGGYRAFLWRPP KHNRTVRVVCREWSITDNARYSDFSCMMEQVIR
Sequences:
>Translated_113_residues MAEIKTLHLVPREGMQVSEKPSVVRVRFGDGYEQRRPTGLNAQLKTFQAVFRVTDEATRRWLDEFLSWHGGYRAFLWRPP KHNRTVRVVCREWSITDNARYSDFSCMMEQVIR >Mature_112_residues AEIKTLHLVPREGMQVSEKPSVVRVRFGDGYEQRRPTGLNAQLKTFQAVFRVTDEATRRWLDEFLSWHGGYRAFLWRPPK HNRTVRVVCREWSITDNARYSDFSCMMEQVIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13432; Mature: 13300
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEIKTLHLVPREGMQVSEKPSVVRVRFGDGYEQRRPTGLNAQLKTFQAVFRVTDEATRR CCCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH WLDEFLSWHGGYRAFLWRPPKHNRTVRVVCREWSITDNARYSDFSCMMEQVIR HHHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure AEIKTLHLVPREGMQVSEKPSVVRVRFGDGYEQRRPTGLNAQLKTFQAVFRVTDEATRR CCCEEEEECCCCCCCCCCCCCEEEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH WLDEFLSWHGGYRAFLWRPPKHNRTVRVVCREWSITDNARYSDFSCMMEQVIR HHHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA