Click here to switch to the map view.

The map label for this gene is ybhJ [H]

Identifier: 218688556

GI number: 218688556

Start: 762498

End: 764759

Strand: Direct

Name: ybhJ [H]

Synonym: ECED1_0735

Alternate gene names: 218688556

Gene position: 762498-764759 (Clockwise)

Preceding gene: 218688555

Following gene: 218688560

Centisome position: 14.64

GC content: 51.28

Gene sequence:

>2262_bases
ATGATCAAGTTATCTGAAAAAGGCGTGTTTCTCGCCAGCAATAACGAAATAATTGCCGAAGAACATTTCACCGACGAAAT
AAAAAAAGAAGAAGCAAAAAAAGGCACTATTGCCTGGTCTATTCTCTCTTCTCATAATACGTCCGGAAATATGGATAAAC
TTAAAATTAAGTTTGATTCATTAGCCTCTCACGATATTACCTTTGTTGGTATTGTACAGACCGCTAAAGCGTCCGGTATG
GAACGTTTCCCGCTGCCGTATGTGCTGACCAACTGCCATAACTCACTCTGCGCCGTCGGCGGCACCATTAACGGTGATGA
CCATGTTTTTGGTTTATCGGCGGCGCAGCGTTATGGCGGTATTTTTGTGCCACCGCATATTGCGGTCATCCATCAATATA
TGCGTGAAATGATGGCAGGCGGCAGCAAAATGATCCTCGGGTCAGACAGCCATACCCGTTACGGTGCGTTAGGGACAATG
GCGGTTGGCGAGGGCGGCGGCGAGTTGGTAAAACAGCTGCTTAATGACACCTGGGATATCGACTATCCGGGCGTGGTTGC
GGTGCATCTGACCGGAAAACCTGCGCCGTATGTGGGGCCGCAGGATGTGGCGCTGGCTATCATCGGTGCTGTGTTCAAAA
ACGGTTACGTCAAAAACAAAGTGATGGAGTTCGTAGGTCCCGGTGTTGCAGCGCTCTCTACCGATTTCCGTAACAGCGTT
GACGTGATGACCACTGAAACGACCTGTTTAAGTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCA
CGGTCGCGGCCAGGATTACTGCCAACTTAACCCTCAACCAATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCG
CCATCAAACCAATGATTGCGCTGCCATTCCACCCGAGCAACGTGTATGAAATCGACACGCTGAACCAGAACCTGACCGAC
ATTCTGCGTGAGATTGAAATTGAGTCCGAACGCGTGGCGCACGGTAAAGCCAAACTCTCGCTGCTGGATAAAGTGGAAAA
TGGTCGCCTGAAAGTGCAGCAGGGGATTATCGCGGGCTGTTCTGGCGGTAACTATGAAAACGTCATCGCGGCGGCGAGTG
CGCTGCGCGGTCAATCCTGCGGCAACGATACCTTCTCGTTGGCGGTTTACCCGTCATCACAGCCGGTGTTTATGGATCTC
GCCAAAAAAGGTGTGGTCGCAGATTTGATTGGCGCAGGCGCAATCATCAGAACCGCGTTCTGCGGCCCATGCTTTGGTGC
GGGCGATACGCCAATCAACAACGGTTTGAGTATTCGCCACACCACGCGTAACTTCCCGAACCGCGAAGGCTCTAAGCCAG
CTAATGGGCAGATGTCAGCGGTGGCGTTGATGGACGCTCGTTCTATTGCGGCGACTGCGGCAAACGGTGGCTATTTAACT
TCGGCCAGCGAGCTGGATTGCTGGGACAACGTGCCGGAGTACGCCTTCGATGTAACGCCGTATAAAAATCGCGTCTATCA
AGGCTTTGTGAAAGGGGCGACCCAGCAACCGCTGATCTACGGACCGAACATCAAAGACTGGCCGGAATTGGGCGCGCTGA
CTGACAATATCGTCCTCAAAGTGTGCTCGAAGATCCTCGACGAAGTAACCACCACCGACGAACTGATTCCTTCCGGTGAA
ACCTCTTCTTATCGTTCAAATCCGATTGGTCTGGCGGAGTTTACCCTGTCACGCCGCGATCCAGGTTATGTTGGCAGAAG
TAAAGCGACTGCTGAGCTGGAAAATCAGCGTCTGGCGGGAAATGTCAGTGAGCTGGCAGATGTGTTTGCGCGCATTAAGC
AGATTGCTGGTCAGGAACATGTTGATCCGCTGCAAACTGAAATTGGCAGCATGGTTTATGCGGTGAAACCAGGCGATGGT
TCTGCGCGTGAACAGGCGGCGAGTTGTCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACG
CTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAGATGGCGGAAGTACCGAACTTTGACGTAGGTGATTACA
TTTATATCCCTGGCATTAAAGCGGCGCTGGATAATCCTGGAACGACGTTTAAAGGTTATGTGATCCATGAAGATGCACCG
GTGACGGAGATTACGCTCTATATGGAAAGTATGACTGCTGAAGAGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTT
CAATAAAAACCGTCAGATGTAA

Upstream 100 bases:

>100_bases
TTCACTCGCTTGTCGCCTTCCTGCAACTCGAATTATTTAGAGTATATCCATTTATTATCTTTCTGCGCACTTCACGGTGC
GCAGATATCTGGAGCATTTG

Downstream 100 bases:

>100_bases
AAAGCGCCATGTGAATGTAGGTCGCATCCGGCACTTATTGTCGGATGCGATGCTGGCGCATCTTATCCGACCGACAAATC
GCATCGAACCGTAGGCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 753; Mature: 753

Protein sequence:

>753_residues
MIKLSEKGVFLASNNEIIAEEHFTDEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGM
ERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGSKMILGSDSHTRYGALGTM
AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSV
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTD
ILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAASALRGQSCGNDTFSLAVYPSSQPVFMDL
AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGE
TSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELADVFARIKQIAGQEHVDPLQTEIGSMVYAVKPGDG
SAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPNFDVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP
VTEITLYMESMTAEEREIIKAGSLINFNKNRQM

Sequences:

>Translated_753_residues
MIKLSEKGVFLASNNEIIAEEHFTDEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGM
ERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGSKMILGSDSHTRYGALGTM
AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSV
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTD
ILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAASALRGQSCGNDTFSLAVYPSSQPVFMDL
AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGE
TSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELADVFARIKQIAGQEHVDPLQTEIGSMVYAVKPGDG
SAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPNFDVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP
VTEITLYMESMTAEEREIIKAGSLINFNKNRQM
>Mature_753_residues
MIKLSEKGVFLASNNEIIAEEHFTDEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDSLASHDITFVGIVQTAKASGM
ERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGGIFVPPHIAVIHQYMREMMAGGSKMILGSDSHTRYGALGTM
AVGEGGGELVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSV
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTD
ILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGCSGGNYENVIAAASALRGQSCGNDTFSLAVYPSSQPVFMDL
AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGE
TSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAGNVSELADVFARIKQIAGQEHVDPLQTEIGSMVYAVKPGDG
SAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPNFDVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP
VTEITLYMESMTAEEREIIKAGSLINFNKNRQM

Specific function: Unknown

COG id: COG1048

COG function: function code C; Aconitase A

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aconitase/IPM isomerase family [H]

Homologues:

Organism=Homo sapiens, GI4501867, Length=752, Percent_Identity=24.8670212765957, Blast_Score=138, Evalue=2e-32,
Organism=Homo sapiens, GI8659555, Length=401, Percent_Identity=23.4413965087282, Blast_Score=69, Evalue=1e-11,
Organism=Escherichia coli, GI87081781, Length=753, Percent_Identity=98.539176626826, Blast_Score=1547, Evalue=0.0,
Organism=Caenorhabditis elegans, GI25149337, Length=742, Percent_Identity=23.8544474393531, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI32564738, Length=719, Percent_Identity=23.9221140472879, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI25149342, Length=609, Percent_Identity=23.3169129720854, Blast_Score=95, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17568399, Length=667, Percent_Identity=22.3388305847076, Blast_Score=77, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6323335, Length=711, Percent_Identity=23.9099859353024, Blast_Score=140, Evalue=9e-34,
Organism=Saccharomyces cerevisiae, GI6322261, Length=751, Percent_Identity=23.8348868175766, Blast_Score=121, Evalue=5e-28,
Organism=Saccharomyces cerevisiae, GI6320440, Length=414, Percent_Identity=25.6038647342995, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6321429, Length=334, Percent_Identity=25.1497005988024, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28571643, Length=678, Percent_Identity=24.188790560472, Blast_Score=117, Evalue=4e-26,
Organism=Drosophila melanogaster, GI281365315, Length=708, Percent_Identity=23.728813559322, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI17864292, Length=708, Percent_Identity=23.728813559322, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI161076999, Length=660, Percent_Identity=23.7878787878788, Blast_Score=103, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015931
- InterPro:   IPR015937
- InterPro:   IPR001030
- InterPro:   IPR015928
- InterPro:   IPR015932
- InterPro:   IPR015935
- InterPro:   IPR000573 [H]

Pfam domain/function: PF00330 Aconitase; PF00694 Aconitase_C [H]

EC number: NA

Molecular weight: Translated: 81479; Mature: 81479

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLSEKGVFLASNNEIIAEEHFTDEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDS
CEEECCCCEEEECCCCEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECC
LASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGG
CCCCCEEEEEEEEHHHHCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCEEECHHHHHCCC
IFVPPHIAVIHQYMREMMAGGSKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDI
EECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCC
DYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSV
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCC
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIA
EEEEECHHHHHHHHCCHHHHHHEEEECCCCCCCEEECCCCCEEECCEEEEEHHHCCCEEE
LPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGC
ECCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCEEEECCEEEEC
SGGNYENVIAAASALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAF
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHCCHHHHHHH
CGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHEECCCCCEEC
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLK
CCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHCCHHHHHHHH
VCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAG
HHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCC
NVSELADVFARIKQIAGQEHVDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIA
CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EEYATKRYRSNVINWGMLPLQMAEVPNFDVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP
HHHHHHHHHHCCCCCCCCCEEHHCCCCCCCCCEEEECCCHHHCCCCCCEEEEEEEECCCC
VTEITLYMESMTAEEREIIKAGSLINFNKNRQM
CEEEEEEHHHHCHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure
MIKLSEKGVFLASNNEIIAEEHFTDEIKKEEAKKGTIAWSILSSHNTSGNMDKLKIKFDS
CEEECCCCEEEECCCCEEEHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEECC
LASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVFGLSAAQRYGG
CCCCCEEEEEEEEHHHHCCCCCCCCCHHHHHCCCCCEEECCCCCCCCCEEECHHHHHCCC
IFVPPHIAVIHQYMREMMAGGSKMILGSDSHTRYGALGTMAVGEGGGELVKQLLNDTWDI
EECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCC
DYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVGPGVAALSTDFRNSV
CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCC
DVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYYDGCISVDLSAIKPMIA
EEEEECHHHHHHHHCCHHHHHHEEEECCCCCCCEEECCCCCEEECCEEEEEHHHCCCEEE
LPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLLDKVENGRLKVQQGIIAGC
ECCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCCCCEEEECCEEEEC
SGGNYENVIAAASALRGQSCGNDTFSLAVYPSSQPVFMDLAKKGVVADLIGAGAIIRTAF
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHCCHHHHHHH
CGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQMSAVALMDARSIAATAANGGYLT
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEEHHHHHHEECCCCCEEC
SASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNIVLK
CCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHCCHHHHHHHH
VCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVGRSKATAELENQRLAG
HHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCC
NVSELADVFARIKQIAGQEHVDPLQTEIGSMVYAVKPGDGSAREQAASCQRVIGGLANIA
CHHHHHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
EEYATKRYRSNVINWGMLPLQMAEVPNFDVGDYIYIPGIKAALDNPGTTFKGYVIHEDAP
HHHHHHHHHHCCCCCCCCCEEHHCCCCCCCCCEEEECCCHHHCCCCCCEEEEEEEECCCC
VTEITLYMESMTAEEREIIKAGSLINFNKNRQM
CEEEEEEHHHHCHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]