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The map label for this gene is ybgL [H]

Identifier: 218688510

GI number: 218688510

Start: 713103

End: 713837

Strand: Direct

Name: ybgL [H]

Synonym: ECED1_0685

Alternate gene names: 218688510

Gene position: 713103-713837 (Clockwise)

Preceding gene: 218688509

Following gene: 218688511

Centisome position: 13.69

GC content: 56.6

Gene sequence:

>735_bases
ATGAAAATTGACCTGAACGCCGATCTGGGCGAAGGCTGCGCCAGCGACGCAGAACTATTAACGCTGGTTTCCTCTGCCAA
TATTGCCTGTGGATTTCATGCAGGCGATGCGCAAACCATGCAGGCTTGCGTGCGTGAAGCAATAAAAAACGGTGTTGCGA
TTGGCGCGCACCCGAGTTTTCCCGACAGGGAAAATTTTGGTCGCAGCGCCATGCAGCTGCCGCCAGAAACCGTTTTCGCC
CAGACGCTGTATCAAATTGGCGCGCTGGCAGCGATTACCCGTGCGCAAGGCGGCGTAATGTGTCATGTCAAACCGCACGG
CATGTTATACAACCAGGCGGCGAAAGAGGCACAACTGGCAGACGCCATCGCCAGAGCGGTATACGCTTGCGATCCGGCAT
TGATTCTCGTCGGGCTGGCAGGAAGCGAGCTGATTCGTGCAGGCGAACGATATGGCCTGGTAACACGCGAGGAAGTGTTT
GCCGATCGCGGTTATCAGGCAGACGGTTCGCTGGTGCCGCGAAGCCAGCCAGGCGCGTTGATTGAAAACGAAGAACAGGC
GCTGGCGCAAACGTTGGAGATGGTGCAATACGGCAGAGTCAAAAGTATCACCGGCGAATGGGCAATGGTCACGGCGCAAA
CGGTCTGCCTACATGGCGATGGCGAGCACGCACTGGCGTTCGCCCGCCGATTACGAGCTACATTTGCTGAAAAGGGGATT
GTTGTCGCAGCATAA

Upstream 100 bases:

>100_bases
GGTCAGCCGATTCATTTTGTCCAGTGTTCACTGGAAGAGGCACTGAAAGCACGGCAAGATCAACAACGTTATTTCGAACA
ATTAGCATGGCGGCTGCACA

Downstream 100 bases:

>100_bases
CCCCGCTTAATAAAGAATGAAAAAAGGATATCACCATGCCTGAAGGCCCGGAGATCCGCCGTGCAGCGGATAACCTGGAG
GCGGCGATCAAAGGCAAACC

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACVREAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVFA
QTLYQIGALAAITRAQGGVMCHVKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLAGSELIRAGERYGLVTREEVF
ADRGYQADGSLVPRSQPGALIENEEQALAQTLEMVQYGRVKSITGEWAMVTAQTVCLHGDGEHALAFARRLRATFAEKGI
VVAA

Sequences:

>Translated_244_residues
MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACVREAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVFA
QTLYQIGALAAITRAQGGVMCHVKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLAGSELIRAGERYGLVTREEVF
ADRGYQADGSLVPRSQPGALIENEEQALAQTLEMVQYGRVKSITGEWAMVTAQTVCLHGDGEHALAFARRLRATFAEKGI
VVAA
>Mature_244_residues
MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACVREAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVFA
QTLYQIGALAAITRAQGGVMCHVKPHGMLYNQAAKEAQLADAIARAVYACDPALILVGLAGSELIRAGERYGLVTREEVF
ADRGYQADGSLVPRSQPGALIENEEQALAQTLEMVQYGRVKSITGEWAMVTAQTVCLHGDGEHALAFARRLRATFAEKGI
VVAA

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=244, Percent_Identity=94.2622950819672, Blast_Score=469, Evalue=1e-134,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 25857; Mature: 25857

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACVREAIKNGVAIGAHPSF
CEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCEEECCCCCC
PDRENFGRSAMQLPPETVFAQTLYQIGALAAITRAQGGVMCHVKPHGMLYNQAAKEAQLA
CCHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
DAIARAVYACDPALILVGLAGSELIRAGERYGLVTREEVFADRGYQADGSLVPRSQPGAL
HHHHHHHHHCCHHHEEEECCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
IENEEQALAQTLEMVQYGRVKSITGEWAMVTAQTVCLHGDGEHALAFARRLRATFAEKGI
CCCHHHHHHHHHHHHHHCCHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCE
VVAA
EEEC
>Mature Secondary Structure
MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACVREAIKNGVAIGAHPSF
CEEECCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCEEECCCCCC
PDRENFGRSAMQLPPETVFAQTLYQIGALAAITRAQGGVMCHVKPHGMLYNQAAKEAQLA
CCHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHH
DAIARAVYACDPALILVGLAGSELIRAGERYGLVTREEVFADRGYQADGSLVPRSQPGAL
HHHHHHHHHCCHHHEEEECCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
IENEEQALAQTLEMVQYGRVKSITGEWAMVTAQTVCLHGDGEHALAFARRLRATFAEKGI
CCCHHHHHHHHHHHHHHCCHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHCCE
VVAA
EEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA