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The map label for this gene is tnpA1 [H]

Identifier: 218688149

GI number: 218688149

Start: 316227

End: 316709

Strand: Reverse

Name: tnpA1 [H]

Synonym: ECED1_0298

Alternate gene names: 218688149

Gene position: 316709-316227 (Counterclockwise)

Preceding gene: 218688150

Following gene: 218688147

Centisome position: 6.08

GC content: 46.58

Gene sequence:

>483_bases
TTGCGGTCTGGCAACTGCAAAAGTTCAACAAGAAATCAAAAGGGGGTCCCAATGGGGGACGAAAAGAGCTTAGCGCACAC
CCGATGGAACTGTAAATATCACATAGTTTTCGCGCCCAAATACCGAAGACAAGCGTTCTATGGAGAGAAGCGTAGGGCAG
TAGGCAGCATATTAAGAAAATTGTGTGAATGGAAAAACGTACGAATTCTGGAAGCGGAATGTTGTGCAGATCATATTCAC
ATGCTTCTGGAGATCCCGCCGAAGATGAGTGTGTCGAGCTTCATGGGGTATCTGAAGGGTAAAAGTAGTCTGATGCTTTA
CGAGCAGTTTGGGGATCTAAAATTCAAATACAGGAACAGGGAGTTCTGGTGCAGAGGGTACTATGTCGATACGGTGGGTA
AGAACACGGCGAAGATACGGGAATACATAAAGCACCAGCTTGAAGAGGATAAAACGGGCAGCCCGTTTACGGGCCGTAAG
TAA

Upstream 100 bases:

>100_bases
TGGCTTTTTTGTCTATGCCCCCCCCAGCTAGGCTGGGGGGGCCGGAAAGCTTTCAGCTTTAAGCCAGTTATTAAAACCCC
TTTTGATTTGTTAAAACATC

Downstream 100 bases:

>100_bases
CGAAGTTTGATGCAAATGTCAGATCGTATGCGCCTGTTAGGACGCGGCTGGTAAGAGAGCCTTACAGGCGCATCAGAAAA
ACCTCCGGCTATGCCGGAGG

Product: transposase IS605 family, IS200 group

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRSGNCKSSTRNQKGVPMGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIH
MLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIREYIKHQLEEDKTGSPFTGRK

Sequences:

>Translated_160_residues
MRSGNCKSSTRNQKGVPMGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIH
MLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIREYIKHQLEEDKTGSPFTGRK
>Mature_160_residues
MRSGNCKSSTRNQKGVPMGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVRILEAECCADHIH
MLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIREYIKHQLEEDKTGSPFTGRK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 18817; Mature: 18817

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSGNCKSSTRNQKGVPMGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRK
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCHHHHHHHCHHHHHHHHHHHH
LCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNR
HHCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCC
EFWCRGYYVDTVGKNTAKIREYIKHQLEEDKTGSPFTGRK
EEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRSGNCKSSTRNQKGVPMGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRK
CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCHHHHHHHCHHHHHHHHHHHH
LCEWKNVRILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKYRNR
HHCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCC
EFWCRGYYVDTVGKNTAKIREYIKHQLEEDKTGSPFTGRK
EEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]