| Definition | Escherichia coli ED1a chromosome, complete genome. |
|---|---|
| Accession | NC_011745 |
| Length | 5,209,548 |
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The map label for this gene is 218688095
Identifier: 218688095
GI number: 218688095
Start: 256417
End: 257709
Strand: Reverse
Name: 218688095
Synonym: ECED1_0234
Alternate gene names: NA
Gene position: 257709-256417 (Counterclockwise)
Preceding gene: 218688096
Following gene: 218688094
Centisome position: 4.95
GC content: 59.32
Gene sequence:
>1293_bases ATGGAACCACTTATGGCTGAGGAAAAACAGCAATCCCGCCAGGCCTCACTGACTTTACAGGTGATGAATGGCAACGAACT GGAAAGCGGACGCGCCGCAAAATGCCTGTTCAGCGAAAACGGCGGTGATATTGGCCATACGCCGGAATGTCACTGGCAGG TACAGGACCGGGCGGGAAGCATTGCTGCGCGTGCCTGTACCGTTATCCGGCACGACGGAGCCTATTGCCTGCGGTGCCTG ACGCCGGGACTGATGATTAATCTGGCCCCGGCCTCTTCCGATGCGCTCATCCGCCTGCGCCAGGGGGATGAGATCCAGCT CGGCGCACTGGCGCTGAAAGTGTTTCTGCATGACGGTGCAGCTGTTACCTATGACGAGCGGATGGCGACCCCGGAAACGA TTGTAATGAACCGCGACAGTCTGGCGGACACCCTGCTGACCACCGAGGGACAACCGGCGTATCCGGGAATGCCGTTCCAG CATCAGCTTGCCCCCACGGTGGCGCACGGTTTTTCCAGCGATCCGCTCCAGGCACTCCAGACGGAAAGCCTGATGGTGGC AGATGATCCGATCGCCCCACGCGTTTCCCGGCCCGTAGCCCCCGCATCCGATCTGACAGGTGCAAACGGGATCAACACGC CGTTTATGGATCTGCCGCCCGGCAATGCCCGTCATGAGGACGGCGATGAATTTTCTGCCATGGCGCAGTACCACCTGGCC GTAACCCCGCTGCTGCGCGGTATGGAGTGTCCGCTGACGCTGCACAATTCTCAGGATGCGGATGAGTTTCTCGAAGAGGC CGGACGGGCGTTGCAGGCCGCCATTAAGGGATTGCTGAGTCTGCAACAACAACAGAACAGCCTGTCGGATAAACACCTGC GTCCACTAGAAGACAACCCGTTGCGCCTTGATATGGACTATGCCACCGCGCTGAACGTCATGTTCGCCGAGGGTAAAAGC CCGGTACATCTCGCAGCACCTGCGGCCATCGCCGAAAGCCTGCGCAACATCCGGCATCATGAAGAGGCTAACCGGGCGGC GATTGTGGAAGCGTTGCGTGTCATGCTGGACGCCTTTTCGCCGGGCAACCTGATGCGCCGCTTTGCGCAATACCGCCGCA GCCATGAACTGCGCCAGAAAATGGACGACGCCTGGGCATGGCAGATGTACAGCAACTATTACGATGAGCTGGGCTCCAGC CGACAGCAGGGATTTGAAATGCTGTTCAATGAAGTTTATGCCCAGGTCTATGACCGGGTGCTGCGCGAAAAACAGCGGGA GCCGGAAGCATGA
Upstream 100 bases:
>100_bases CGCCTTGGCGATCCGGCCAGCTCCCGCCTCGGCAGAACCAGCTTTATTGGTCAGCCGAAAGTACCGCCCGCCATCACAAT CCGAATCAGGGAATAATTCT
Downstream 100 bases:
>100_bases ACGGCAAAGCGTTTCTGGCCTGCGTTCTGATGAGCGTCGTATTAACTGGCTGTGAAACAGCGAAAAAAATCAGCCAGGTG ATCCGCAATCCGGATATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion System FHA Domain Protein; FHA Domain Containing Protein
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MEPLMAEEKQQSRQASLTLQVMNGNELESGRAAKCLFSENGGDIGHTPECHWQVQDRAGSIAARACTVIRHDGAYCLRCL TPGLMINLAPASSDALIRLRQGDEIQLGALALKVFLHDGAAVTYDERMATPETIVMNRDSLADTLLTTEGQPAYPGMPFQ HQLAPTVAHGFSSDPLQALQTESLMVADDPIAPRVSRPVAPASDLTGANGINTPFMDLPPGNARHEDGDEFSAMAQYHLA VTPLLRGMECPLTLHNSQDADEFLEEAGRALQAAIKGLLSLQQQQNSLSDKHLRPLEDNPLRLDMDYATALNVMFAEGKS PVHLAAPAAIAESLRNIRHHEEANRAAIVEALRVMLDAFSPGNLMRRFAQYRRSHELRQKMDDAWAWQMYSNYYDELGSS RQQGFEMLFNEVYAQVYDRVLREKQREPEA
Sequences:
>Translated_430_residues MEPLMAEEKQQSRQASLTLQVMNGNELESGRAAKCLFSENGGDIGHTPECHWQVQDRAGSIAARACTVIRHDGAYCLRCL TPGLMINLAPASSDALIRLRQGDEIQLGALALKVFLHDGAAVTYDERMATPETIVMNRDSLADTLLTTEGQPAYPGMPFQ HQLAPTVAHGFSSDPLQALQTESLMVADDPIAPRVSRPVAPASDLTGANGINTPFMDLPPGNARHEDGDEFSAMAQYHLA VTPLLRGMECPLTLHNSQDADEFLEEAGRALQAAIKGLLSLQQQQNSLSDKHLRPLEDNPLRLDMDYATALNVMFAEGKS PVHLAAPAAIAESLRNIRHHEEANRAAIVEALRVMLDAFSPGNLMRRFAQYRRSHELRQKMDDAWAWQMYSNYYDELGSS RQQGFEMLFNEVYAQVYDRVLREKQREPEA >Mature_430_residues MEPLMAEEKQQSRQASLTLQVMNGNELESGRAAKCLFSENGGDIGHTPECHWQVQDRAGSIAARACTVIRHDGAYCLRCL TPGLMINLAPASSDALIRLRQGDEIQLGALALKVFLHDGAAVTYDERMATPETIVMNRDSLADTLLTTEGQPAYPGMPFQ HQLAPTVAHGFSSDPLQALQTESLMVADDPIAPRVSRPVAPASDLTGANGINTPFMDLPPGNARHEDGDEFSAMAQYHLA VTPLLRGMECPLTLHNSQDADEFLEEAGRALQAAIKGLLSLQQQQNSLSDKHLRPLEDNPLRLDMDYATALNVMFAEGKS PVHLAAPAAIAESLRNIRHHEEANRAAIVEALRVMLDAFSPGNLMRRFAQYRRSHELRQKMDDAWAWQMYSNYYDELGSS RQQGFEMLFNEVYAQVYDRVLREKQREPEA
Specific function: Unknown
COG id: COG3456
COG function: function code T; Uncharacterized conserved protein, contains FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47647; Mature: 47647
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPLMAEEKQQSRQASLTLQVMNGNELESGRAAKCLFSENGGDIGHTPECHWQVQDRAGS CCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCH IAARACTVIRHDGAYCLRCLTPGLMINLAPASSDALIRLRQGDEIQLGALALKVFLHDGA HHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEEHHHHHHHHHHCCCC AVTYDERMATPETIVMNRDSLADTLLTTEGQPAYPGMPFQHQLAPTVAHGFSSDPLQALQ EEEEHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHC TESLMVADDPIAPRVSRPVAPASDLTGANGINTPFMDLPPGNARHEDGDEFSAMAQYHLA CCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH VTPLLRGMECPLTLHNSQDADEFLEEAGRALQAAIKGLLSLQQQQNSLSDKHLRPLEDNP HHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC LRLDMDYATALNVMFAEGKSPVHLAAPAAIAESLRNIRHHEEANRAAIVEALRVMLDAFS EEEEEHHHHHHHHHEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGNLMRRFAQYRRSHELRQKMDDAWAWQMYSNYYDELGSSRQQGFEMLFNEVYAQVYDRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LREKQREPEA HHHHHCCCCC >Mature Secondary Structure MEPLMAEEKQQSRQASLTLQVMNGNELESGRAAKCLFSENGGDIGHTPECHWQVQDRAGS CCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCH IAARACTVIRHDGAYCLRCLTPGLMINLAPASSDALIRLRQGDEIQLGALALKVFLHDGA HHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCCCCEEEECCCCCEEHHHHHHHHHHCCCC AVTYDERMATPETIVMNRDSLADTLLTTEGQPAYPGMPFQHQLAPTVAHGFSSDPLQALQ EEEEHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHC TESLMVADDPIAPRVSRPVAPASDLTGANGINTPFMDLPPGNARHEDGDEFSAMAQYHLA CCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH VTPLLRGMECPLTLHNSQDADEFLEEAGRALQAAIKGLLSLQQQQNSLSDKHLRPLEDNP HHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCC LRLDMDYATALNVMFAEGKSPVHLAAPAAIAESLRNIRHHEEANRAAIVEALRVMLDAFS EEEEEHHHHHHHHHEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGNLMRRFAQYRRSHELRQKMDDAWAWQMYSNYYDELGSSRQQGFEMLFNEVYAQVYDRV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LREKQREPEA HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA