Definition Escherichia coli S88, complete genome.
Accession NC_011742
Length 5,032,268

Click here to switch to the map view.

The map label for this gene is pbpC

Identifier: 218559445

GI number:

Start: 2688178

End: 2690490

Strand: Reverse

Name: pbpC

Synonym: ECS88_2695

Alternate gene names: NA

Gene position: NA

Preceding gene: 218559446

Following gene: 218559444

Centisome position: NA

GC content: NA

Gene sequence:

>2313_bases
ATGCCTCGCCTGTTAACCAAACGCGGCTGCTGGATAATGCTGGCAGCCGCGCCTTTTATCATCATTCTGGCAGCATGGGC
AGCAGATAAACTCTGGCCTCTGCCATTGCAAGAAGTGAATCCTGCACGCGTGGTGGTGGCGCAGGATGGTACGCCACTCT
GGCGTTTCGCCGATGCTGACGGCATCTGGCGTTATCCGGTAACAATCGAAGATGTTTCTCCACGTTACCTTGAAGCGCTG
ATCAATTATGAAGATCGCTGGTTCTGGAAGCATCCGGGGGTGAATCCGTTCTCGGTGGCGCGTGCAGCCTGGCAAGATCT
CACGTCGGGTCGGGTCATTTCCGGCGGCAGCACGCTCACCATGCAGGTGGCGCGCCTGCTTGATCCTCACCCCAAAACGT
TTGGCGGCAAAATTCGCCAGCTCTGGCGCGCGTTGCAACTGGAATGGCATCTGTCTAAACGTGAAATTCTGACCTTGTAT
CTTAACCGTGCCCCGTTTGGCGGTACGTTGCAGGGGATTGGTGCGGCAAGTTGGGCTTACCTCGGGAAATCGCCTGCGAA
TTTAAGCTATTCCGAGGCGGCAATGCTGGCGGTTTTGCCGCAAGCGCCCAGCCGTCTTCGCCCGGATCGTTGGCCGGAGC
GTGCCGAAGCCGCGCGTAATAAAGTGCTCGAACGGATGGCCGTGCAAGGTGTGTGGTCCCGTGAGCGGGTAAAAGAGTCA
AGGGAAGAACCCATCTGGCTGGCACCCCGACAAATGCCGCAACTGGCACCGCTGTTTTCGCGCATGATGCTCGGTAAAAG
CAAAAGCGACAAAATCGTTACTACGCTGGATGCCGGTCTTCAACGACGTCTGGAAGAACTGGCGCAAAACTGGAAAGGAC
GATTGCCACCGCGCAGCTCACTGGCGATGATCGTGGTTGATCATACCGATATGCGTGTTCGCGGCTGGGTGGGATCAGTT
GATCTCAACGATGATTCACGCTTTGGTCATGTTGATATGGTCAATGCGATCCGATCGCCAGGATCGGTGCTCAAACCGTT
TGTTTATGGTCTGGCGCTGGATGAAGGCTTGATCCACCCGGCATCGCTGTTGCAAGACGTCCCCAGACGCACCGGTGATT
ACCGACCTGGCAACTTTGACAGCGGTTTTCATGGCCCGATCAGCATGAGCGAGGCGCTGGTGCGCTCGCTGAATTTACCA
GCTGTGCAGGTGCTGGAAGCCTATGGACCGAAACGGTTTGCGGCAAAATTACGCAATGTTGGATTGCCGTTGTATCTGCC
CAACGGTGCTGCGCCGAATCTTTCGCTCATTCTCGGCGGCGCTGGTGCAAAACTGGAAGATATGGCGGCGGCCTATACCG
CGTTTGCTCGCCACGGCAAGGCAGGTAAATTGCGCTTACAGCCTGACGATCCGCTGCTTGAACGGCCTTTAATGTCGTCG
GGGGCTGCGTGGATCATTCGCCGGATTATGGCTGATGAAGCGCAACCCTTGCCGGATGGTGCCTTGCCGCGCGTCGCCCC
ACTGGCATGGAAAACGGGCACCAGCTATGGCTATCGTGATGCCTGGGCGATTGGGGTTAACGCTCGCTATGTCATTGGGA
TCTGGACTGGCAGACCGGACGGCACGCCCGTTGTTGGTCAGTTTGGCTTTGCCAGTGCCGTACCGCTGTTGAATCAGGTT
AATAATATCTTACTGTCGCGCAGTGTGAATTTGCCGGAAGACCCACGTCCTGACTCTGTAAGTCGTGGCGTTATCTGCTG
GCCGGGCGGACAGTCTTTGCCGGAAGGTGACGGTAACTGTCGCCGCCGCCTAGCAACCTGGCTGCTGGACGGGAGCCAGC
CGCCAACTCTATTACTGCCGGAGCAGGAAGGCATTAATGGCATTCGTTTCCCCATCTGGCTGGATGAAAACGGCAAACGT
GTTGCCGCTGATTGCCCTCAGGCGCGACAAGAAATGATAAATGTCTGGCCGCTACCGCTGGAACCCTGGCTGCCCGCATC
AGAACGTCGCGCTGTGCGCTTGCCACCGGCCTCGACAATTTGCCCGCCATACGGTCACGATGCACAACTCCCGCTGCAGC
TAACAGGTGTGCGCGATGGCGCGATTATTAAACGTTTACCGGGCGCAGCGGAAGCGACTTTGCCGTTGCAATCAAGTGGA
GGGGCAGGTGAACGCTGGTGGTTTCTGAATGGCGAACCGTTAACTGAACGTGGGCGCAACGTGACCCTGCATTTGACGGA
TAAAGGCGATTATCAATTGCTGGTGATGGATGACGTGGGGCAAATAGCGACAGTGAAATTTGTCATGCAATAG

Upstream 100 bases:

>100_bases
GGGAACGTATCAGGTGCCGCAGCCTATGGTGGAATCAATGTATGTTCCTCAATGGCGGGCGACTGGTGCGGCTGACGATC
TGTTGATAGTCAGACCGTAA

Downstream 100 bases:

>100_bases
TCTGTTTTGTCCCTGATTGTTGCTTAAACTGGGTTTATTTTAAAAAAATGTTACCTTCATCAATAGTCAACGGCCCTGTT
GCTCATTATAATCCGCGCCA

Product: penicillin-binding protein 1C

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>770_residues
MPRLLTKRGCWIMLAAAPFIIILAAWAADKLWPLPLQEVNPARVVVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEAL
INYEDRWFWKHPGVNPFSVARAAWQDLTSGRVISGGSTLTMQVARLLDPHPKTFGGKIRQLWRALQLEWHLSKREILTLY
LNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAARNKVLERMAVQGVWSRERVKES
REEPIWLAPRQMPQLAPLFSRMMLGKSKSDKIVTTLDAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSV
DLNDDSRFGHVDMVNAIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEALVRSLNLP
AVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAAAYTAFARHGKAGKLRLQPDDPLLERPLMSS
GAAWIIRRIMADEAQPLPDGALPRVAPLAWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDGTPVVGQFGFASAVPLLNQV
NNILLSRSVNLPEDPRPDSVSRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLPEQEGINGIRFPIWLDENGKR
VAADCPQARQEMINVWPLPLEPWLPASERRAVRLPPASTICPPYGHDAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSG
GAGERWWFLNGEPLTERGRNVTLHLTDKGDYQLLVMDDVGQIATVKFVMQ

Sequences:
NA

Specific function: NA

COG id: COG4953

COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein PbpC

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA