Definition Escherichia coli S88, complete genome.
Accession NC_011742
Length 5,032,268

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Identifier: 218559435

GI number:

Start: 2676337

End: 2678598

Strand: Reverse

Name: Not Available

Synonym: ECS88_2685

Alternate gene names: NA

Gene position: NA

Preceding gene: 218559436

Following gene: 218559434

Centisome position: NA

GC content: NA

Gene sequence:

>2262_bases
TTGACTGTATCATTGTCACAGGGAAAGTGCATGCTGCGATGGAAACGCTGTATTATTCTAACATTTATCTCTGGTGCTGC
TTTCGCGGCGCCAGAGATAAATGTTAAGCAAAACGAATCGTTACCTGATTTAGGTAGCCAGGCAGCACAACAGGATGAAC
AAACCAACAAGGGTAAATCGCTGAAAGAGCGCGGAGCCGATTACGTCATCAACTCCGCCACGCAAGGGTTTGAAAACTTG
ACCCCTGAGGCGCTGAAATCTCAGGCCAGAAGCTATCTGCAAAGTCAAATCACCTCAACCGCACAATCTTATATTGAAGA
CACACTCTCTCCCTACGGTAAGGTCCGTTCGAACCTCTCCATTGGTCAGGGCGGCGATCTGGATGGCAGTTCCATCGATT
ATTTTGTTCCCTGGTACGATAATCAAACCACTGTTTATTTCAGCCAATTTTCTGCGCAACGAAAAGAAGATCGTACGATC
GGGAATATTGGCCTTGGGGTAAGGTATAATTTTGATAAATATCTATTGGGTGGAAATATATTTTATGATTATGACTTTAC
CCGTGGACATCGCCGTTTAGGTTTAGGCGCCGAAGCCTGGACGGATTATTTAAAATTCTCAGGCAACTATTATCACCCAC
TTTCTGACTGGAAAGACTCTGAAGATTTCGACTTTTATGAAGAACGCCCTGCGCGCGGCTGGGATATTCGCGCTGAAGCC
TGGCTACCCGCTTACCCGCAGCTTGGCGGAAAAATTGTCTTCGAACAATATTATGGGAATGAAGTCGCGCTTTTTGGTAC
CGATAGTCTGGAGAAAGATCCCTTCGCTGTCACGCTGGGTGTGAAATACCAGCCCGTTCCGCTCATTGTTGTCGGTACAG
ATTTCAAAGCTGGCACTGGCGATAATACCGATCTTTCTGTTAACGCAACGCTGAACTACCAGTTTGGCGTCCCGCTCAAA
GACCAGCTTGATCCTGACAAAGTGAGCGCGGCTCACTCGCTCATGGGTAGCCGTCATGACTTTGTTGAACGTAACAACTT
TATTGTTCTGGAATACAAAGAGAAAGATCCCCTCTATGTCACTTTGTGGCTGAAAGCCGACGTCACGAATGAACATCCCG
AGTGCGTGATTAAAGATACGCCTGAAGAAGCTATCGGGCTGGAAAAATGTAAATGGACCATTAACGCGCTCATTAACCAT
CACTACAAAATCGTTGCTGCCTCCTGGCAGGCGAAAAACAATGCTGCCTCCTGGCAGGCGAAAAACAATGCTGCCTCCTG
GCAGGCGAAAAACAATGCTGCCCGCACGCTGGTGATGCCGGTTATCAAAGAGAATACCCTGACAGAGGGTAACAATAACC
ACTGGAACCTGGTGCTGCCCGCCTGGCAGTACAGTTCCGATCAAGCCGAACAAGAAAAACTCAATACCTGGCGAGTACGT
CTGGCGCTGGAAGATGAAAAGGGCAATCGGCAGAACTCTGGCGTGGTGGAAATCACCGTTCAGCAGGACCGTAAAATAGA
GTTGATTGTTAATAACATCGCGAACGTGCCAGAAGAGAACAACCACAGCCACGAAGCCAGCGCTCAGGCAGATGGCGTTG
ATGGTGTGGTGATGGATCTCGATGTAACCGACAGCTTTGGCGATAACACCGACCGCAATGGCGATGCGCTGCCGGAAGAT
AACCTCACGCCGCAGCTTTACGACGCGCAGGACAAACGAGTGACGTTAACCAACAAGCCTTGCTCGACCGACAACCCCTG
CGTTTTTATCGCTAAACAAGATAAAGAAAAGGGCACTGTCACCCTCTCCAGTACCTTACCCGGCACCTATCGCTGGAAAG
CAAAAGCCGCGCCCTACGATGACAGTAACTATGTGGATGTCACTTTCCTCGGGGCAGAAATTGGTGGGCTAAATGCTTTT
ATCTATCGTGTGGGGGCGGCTAAACCCAGCAACCTGATAGGTAAAGATAAAGAACCGTTGCCGCTCAACAACACTTATCG
ATTTGTTTTGTGGCGCGACAACAATAAAGACGGTGTCTTCCAGCAGGTCGAAAAACTGACTGACGAAGAGATGGTGCAGT
ACGACTACAAGTGGGAATTTACCGGCAAGAGCATCAATGGTGAAGTGGGTGCACAGGCGAACACTTCCAATGAGGACATT
GTGATTCCGGCCACTAACCGTGAAGCGGCGCAAACCTATGGCGCACAAGCGGGAGATGGCTTGCAGGGATACGGTTTACG
CGTGCTGTATACCAAAAAATAA

Upstream 100 bases:

>100_bases
TGTATTTGAGTGAAATCACTAATTTAAATAATTAAGAATATATTTACTCTTTATGACATGCCTTTCTGAATAATCAGGGA
TACAATATTAAAGCTTATTT

Downstream 100 bases:

>100_bases
GATTGGCGTAAGGCCAGTCGGCCAGTCGCTGAAGGTTCATTAAGGAGAGCATCAATGAAGCAGGATAAAAGACGCGGTCT
GACCCGGATCGCATTAGCGC

Product: intimin ((attaching and effacing protein) or invasin protein (sivH-like)

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>753_residues
MTVSLSQGKCMLRWKRCIILTFISGAAFAAPEINVKQNESLPDLGSQAAQQDEQTNKGKSLKERGADYVINSATQGFENL
TPEALKSQARSYLQSQITSTAQSYIEDTLSPYGKVRSNLSIGQGGDLDGSSIDYFVPWYDNQTTVYFSQFSAQRKEDRTI
GNIGLGVRYNFDKYLLGGNIFYDYDFTRGHRRLGLGAEAWTDYLKFSGNYYHPLSDWKDSEDFDFYEERPARGWDIRAEA
WLPAYPQLGGKIVFEQYYGNEVALFGTDSLEKDPFAVTLGVKYQPVPLIVVGTDFKAGTGDNTDLSVNATLNYQFGVPLK
DQLDPDKVSAAHSLMGSRHDFVERNNFIVLEYKEKDPLYVTLWLKADVTNEHPECVIKDTPEEAIGLEKCKWTINALINH
HYKIVAASWQAKNNAASWQAKNNAASWQAKNNAARTLVMPVIKENTLTEGNNNHWNLVLPAWQYSSDQAEQEKLNTWRVR
LALEDEKGNRQNSGVVEITVQQDRKIELIVNNIANVPEENNHSHEASAQADGVDGVVMDLDVTDSFGDNTDRNGDALPED
NLTPQLYDAQDKRVTLTNKPCSTDNPCVFIAKQDKEKGTVTLSSTLPGTYRWKAKAAPYDDSNYVDVTFLGAEIGGLNAF
IYRVGAAKPSNLIGKDKEPLPLNNTYRFVLWRDNNKDGVFQQVEKLTDEEMVQYDYKWEFTGKSINGEVGAQANTSNEDI
VIPATNREAAQTYGAQAGDGLQGYGLRVLYTKK

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA