Definition Escherichia coli S88, complete genome.
Accession NC_011742
Length 5,032,268

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The map label for this gene is ypdE

Identifier: 218559339

GI number:

Start: 2561413

End: 2562450

Strand: Reverse

Name: ypdE

Synonym: ECS88_2579

Alternate gene names: NA

Gene position: NA

Preceding gene: 218559340

Following gene: 218559338

Centisome position: NA

GC content: NA

Gene sequence:

>1038_bases
ATGGATTTATCGCTATTAAAAGCGTTGAGCGAGGCAGATGCGATCGCCTCCTCGGAACAGGAAGTGCGGCAGATCCTGCT
GGAAGAAGCGGATCGCCTGCAAAAAGAAGTGCGATTTGATGGTCTGGGATCGGTGCTGATCCGACTCAATGAGTCGACAG
GTCCGAAGGTGATGATCTGTGCGCATATGGACGAAGTGGGATTTATGGTGCGCAGCATCTCCCGCGAAGGGGCGATCGAT
GTGTTGCCGGTTGGCAATGTACGCATGGCTGCCCGCCAGCTTCAGTCGGTGCGTATCACTACCCGTGAAGAGTGCAAAAT
TCCAGGCCTGCTTGACGGCGATCGGCAGGGGAATGACGTCAGCGCCATGCGCGTGGACATTGGCGCGCGCTCCTGTGACG
AAGTGATGCAGGCAGGAATTCGTCCAGGCGATCGCGTTACCTTCGATACCACTTTTCAGGTTCTCCCTCACCAGCGGGTG
ATGGGGAAAGCCTTTGATGACCGCCTCGGTTGCTATCTGCTGGTGACGTTACTGCGTGAGCTGCACGACGCCGAACTGCC
TGCGGAAGTGTGGCTGGTGGCAAGTTCCAGCGAAGAGGTGGGATTACGCGGCGGGCAAACTGCCACCCGCGCGGTGTCGC
CGGATGTCGCCATTGTGCTTGATACCGCCTGCTGGGCGAAAAACTTTGATTATGGCGCAGCTAACCATCGCCAGATTGGT
AACGGGCCGATGCTGGTGTTAAGCGACAAGTCACTGATTGCGCCGCCAAAACTTATCGCCTGGATCGAAACCGTGGCGGC
AGAAATTGGCGTACCGTTGCAGTCAGATATGTTCAGCAATGGCGGCACGGACGGTGGGGCGGTGCACTTAACCGGCACTG
GCGTACCCACAGTGGTGATGGGGCCAGCAACCCGCCACGGACATTGCGCCGCATCGATTGCCGACTGCCGCGACATTTTG
CAGATGCAGCAACTTTTATCTGCCCTTATTCAACGTTTTACGCGTGAGACGGTTGTTCAACTGACGGATTTCAGATGA

Upstream 100 bases:

>100_bases
AAGGGGGCGTGCGCATCGAAGATGTTGTGCTGGTTACCCCGCAAGGCGCAGAGGTGCTCTACGCCATGCCGAAAACAGTG
TTGCTCACGGGAGAGGCATA

Downstream 100 bases:

>100_bases
TCTCCTGATTAACCCGGAGCGGTTATGTTAACGATTCAATTTCTCTGTCCTTTGCCTAACGGTCTACATGCTCGTCCGGC
GTGGGAACTTAAAGAGCAGT

Product: exoaminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>345_residues
MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAID
VLPVGNVRMAARQLQSVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARSCDEVMQAGIRPGDRVTFDTTFQVLPHQRV
MGKAFDDRLGCYLLVTLLRELHDAELPAEVWLVASSSEEVGLRGGQTATRAVSPDVAIVLDTACWAKNFDYGAANHRQIG
NGPMLVLSDKSLIAPPKLIAWIETVAAEIGVPLQSDMFSNGGTDGGAVHLTGTGVPTVVMGPATRHGHCAASIADCRDIL
QMQQLLSALIQRFTRETVVQLTDFR

Sequences:
NA

Specific function: NA

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA