| Definition | Escherichia coli S88, complete genome. |
|---|---|
| Accession | NC_011742 |
| Length | 5,032,268 |
Click here to switch to the map view.
The map label for this gene is yneF
Identifier: 218558425
GI number:
Start: 1596559
End: 1597977
Strand: Reverse
Name: yneF
Synonym: ECS88_1599
Alternate gene names: NA
Gene position: NA
Preceding gene: 218558426
Following gene: 218558424
Centisome position: NA
GC content: NA
Gene sequence:
>1419_bases ATGCATGTACAGCCCATTTCAACTTTCCGTTTGTTCCAGGAAGGTCATCTGCTACGTAATAGCATCGCTATTTTTGTGCT AACCACGCTGTTCTATTTTATTGGTGCAGAGTTACGACTGGTTCACGAACTTTCTCTTTTCTGGCCGCTGAATGGCGTAA TGGCGGGGGTGTTTGCCCGCTATGTCTGGCTTAATCGACTGCATTACTATGCGATCAGTTATGTGGCGATGCTGGTTTAT GATGCCATAACCACCGAATGGGGGCTGGTTTCACTGGCTATCAATTTCTCCAATATGATGTTTATTGTTACCGTCGCCTT ACTGGTCGCGCGGGATAAGAGTCTGGGAAAAAATAAGTATGAGCCAGTAAGTGCCTTACGGCTATTTAATTACTGTCTGC TTGCCGCATTATTATGCGCTATTGTCGGGGCGATTGGTTCGGTCAGTATTGATAGTCTGGATTTCTGGCCTTTGCTTGCC GACTGGTTTAGTGAGCAATTCTCAACGGGCGTGTTGATCGTGCCTTGTATGCTGACGTTGGCAATTCCTGGAGTGCTGCC GCGCTTTAAAGCAGAGCAGATGATGCCTGCTATCGCGCTTATTGTGTCGGTTATTGCCTCGGTAGTCATTGGTGGAGCGG GGAGTCTGGCGTTTCCGCTCCCTGCATTAATCTGGTGTGCAGTGCGCTATACGCCGCAGGTAACATGTCTGTTGACCTTT GTCACCGGTGCGGTGGAAGTCGTACTGGTGGCAAATTCGGTGATTGATATCTCGGTCGGTTCGCCGTTCTCTATTCCGCA AATGTTCTCCGCACGTCTCGGTATTGCCACGATGGCGATATGCCCAATTATGGTTTCCTTTAGCGTGGCAGCGATCCATT CGCTAATGAAGCAAGTTGCGCTGCGAGCCGACTTTGATTTTCTGACTCAGGTTTACTCACGGTCTGGTCTTTATGAGGCG CTGAAAAGTCCATCGCTGAAACAGACACAACATCTGACGGTCATGCTGCTTGATATCGACTATTTCAAAAGCATTAACGA TAACTATGGACATGAATGTGGCGATAAAGTGTTAAGCGTGTTTGCCCAGCATATTCAGAAGATTGTCGGTGATAAGGGGC TGGTGGCGCGAATGGGCGGCGAAGAATTTGCTGTTGCAGTGCCGTCGGTGAATCCTGTCGATGGCCTGCTAATGGCGGAA AAAATCCGTAAAGGCGTAGAACTTCAACCGTTCACCTGGCAACAAAAAACGCTTTATCTCACGGTAAGTATTGGCGTCGG TAGTGGTTGCGCATCGTACCGAACGCTGACCGATGACTTTAATAAATTGATGGTCGAAGCCGATACGTGTCTGTATCGCT CGAAGAAAGATGGGCGCAACCGTACCAGCACTATGCGTTACGGTGAGGAAGTTGTCTGA
Upstream 100 bases:
>100_bases CTTTAGTTGCCGCCGTTGTCAGCGAACATGCTATCCTTTCTAAGAATTTACTTATTGCGTTGAGATAATTGCCACCCGCA ATTGTATGGACAGATAATTA
Downstream 100 bases:
>100_bases CATCTTTATTTACTCAGAGCGAATTAAATGCAATATGTTCTACCACTTTATGATCCAAGAAAAGGCCTGTTTCCTCGATT AAACCATGATCCGCGCCACA
Product: membrane-associated diguanylate cyclase (GGDEF domain)
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>472_residues MHVQPISTFRLFQEGHLLRNSIAIFVLTTLFYFIGAELRLVHELSLFWPLNGVMAGVFARYVWLNRLHYYAISYVAMLVY DAITTEWGLVSLAINFSNMMFIVTVALLVARDKSLGKNKYEPVSALRLFNYCLLAALLCAIVGAIGSVSIDSLDFWPLLA DWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTF VTGAVEVVLVANSVIDISVGSPFSIPQMFSARLGIATMAICPIMVSFSVAAIHSLMKQVALRADFDFLTQVYSRSGLYEA LKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFAQHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAE KIRKGVELQPFTWQQKTLYLTVSIGVGSGCASYRTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV
Sequences:
NA
Specific function: NA
COG id: NA
COG function: NA
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA