Definition Escherichia coli S88, complete genome.
Accession NC_011742
Length 5,032,268

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The map label for this gene is ydcP

Identifier: 218558367

GI number:

Start: 1520316

End: 1522277

Strand: Direct

Name: ydcP

Synonym: ECS88_1529

Alternate gene names: NA

Gene position: NA

Preceding gene: 218558366

Following gene: 218558369

Centisome position: NA

GC content: NA

Gene sequence:

>1962_bases
GTGACCGTATCTTCTCATCGTCTTGAACTGTTAAGCCCGGCACGCGATGCCGCCATTGCCCGCGAAGCTATTTTGCACGG
TGCCGATGCTGTTTATATCGGCGGCCCTGGTTTTGGTGCCCGTCATAATGCCAGTAATAGCCTGAAAGATATTGCCGAGT
TGGTGCCGTTTGCCCATCGTTATGGTGCAAAAATTTTCGTCACGCTTAACACCATTTTGCATGATGATGAGCTGGAACCC
GCGCAACGGCTGATTACTGACCTCTACCAGACCGGTGTCGATGCGCTGATTGTTCAGGATATGGGGATTCTGGAACTTGA
TATTCCGCCGATTGAACTGCACGCCAGTACGCAGTGCGATATTCGTACAGTAGAAAAAGCGAAGTTCCTCTCTGATGTTG
GCTTCACGCAGATTGTGCTGGCGCGAGAGCTGAATCTTGAGCAGCTCCGCGCGATTCACCAGGCCACGGACGCGACCATT
GAATTCTTTATTCATGGCGCATTGTGCGTGGCCTATTCGGGTCAGTGCTACATTTCTCATGCGCAAACAGGGCGTAGCGC
CAACCGTGGCGATTGCTCGCAGGCGTGCCGTTTGCCATACACATTGAAAGACGATCAGGGGCGGGTGGTTTCCTATGAAA
AACATCTGCTGTCGATGAAAGATAACGATCAGACTGCCAACCTCGGCGCGCTGATTGATGCTGGCGTACGCTCCTTCAAG
ATTGAAGGGCGTTACAAAGATATGAGCTACGTGAAGAATATCACCGCCCATTATCGTCAGATGCTGGATGCCATTATTGA
AGAACGTGGCGATCTGGCGCGCGCTTCATCAGGTCGTACTGAACATTTCTTTGTTCCATCGACGGAAAAGACTTTCCACC
GTGGTAGCACAGATTATTTTGTGAATGCCCGTAAAGGCGATATTGGCGCGTTCGATTCGCCGAAATTTATCGGCCTGCCG
GTGGGCGAAGTATTGAAAGTAGCGAAAGATCATATTGATGTTGCCGTTACCGAGCCACTGGCAAATGGCGATGGCCTGAA
CGTGATGATTAAACGTGAAGTCGTCGGTTTTCGTGCCAATACGGTAGAGAAAACCGGAGAAAATCAGTACCGCGTCTGGC
CCAATGAAATGCCAGCAGATTTGCACAAAATTCGCCCGCATCACCCACTAAACCGTAATCTTGATCATAACTGGCAGCAG
GCACTGACAAAAACCTCCAGCGAACGTCGGGTGGCGGTAGACATTGAACTGGGCGGCTGGCAGGAACAACTGATTCTGAC
CCTCACCAGTGAAGAGGGTGTCAGCATCACACATACGCTGGACGGGCAGTTCGACGAAGCCAATAACGCCGAAAAAGCAA
TGAACAATCTGAAGGATGGTCTGGCAAAACTGGGGCAAACCATCTATTACGCCCGCAATGTGCAAATTAATTTGCCGGGG
GCGCTGTTTGTACCAAACAGTCTGTTAAACCAGTTCCGCCGTGAAGCCGCCGATATGCTTGATGCTGCGCGTCTTGCCAG
TTACCAGCGCGGCAGCCGTAAACCGGTTGCTGATCCTGCGCCAGTTTATCCGCAAACGCATCTGAGTTTCCTCGCGAACG
TATACAACCAGAAAGCGCGTGAATTTTATCATCGCTATGGTGTGCAACTGATTGACGCGGCGTATGAGGCACATGAAGAG
AAGGGCGAAGTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTCAATCTGTGCCCGAAACAGGCGAAAGGCAA
TATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTGCCGCCCAT
GCGAGATGCACGTCATTGGCAAAATCAAAAATCACATACTGAAAATGCCGTTACCGGGAAGCGTAGTGGCATCCGTAAGT
CCGGATGATCTGCTGAAAACATTGCCGAAGCGAAAAGGGTAA

Upstream 100 bases:

>100_bases
TTCCCTCATCCATTACCCGCGCAGTTAAGCGGGAAAACTATTTCGCAACGTCGCGCTTGTGGCTAAAATAGCCGCCATTT
TTCAGCTACTGGATAAGAAA

Downstream 100 bases:

>100_bases
AACGCCAGTTTTCGGGTTACTCACCACTCATCAAATCTGCATGATATTGCCTGCCGGGTAAGGTGTCACGCCGCATCCGG
CAACACACGACTCAACGCTG

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>653_residues
MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNASNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEP
AQRLITDLYQTGVDALIVQDMGILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLEQLRAIHQATDATI
EFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLSMKDNDQTANLGALIDAGVRSFK
IEGRYKDMSYVKNITAHYRQMLDAIIEERGDLARASSGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLP
VGEVLKVAKDHIDVAVTEPLANGDGLNVMIKREVVGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNRNLDHNWQQ
ALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNAEKAMNNLKDGLAKLGQTIYYARNVQINLPG
ALFVPNSLLNQFRREAADMLDAARLASYQRGSRKPVADPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEE
KGEVPVMITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKNHILKMPLPGSVVASVS
PDDLLKTLPKRKG

Sequences:
NA

Specific function: NA

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA