Definition Escherichia coli S88, complete genome.
Accession NC_011742
Length 5,032,268

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The map label for this gene is ydbK

Identifier: 218558334

GI number:

Start: 1475517

End: 1479041

Strand: Reverse

Name: ydbK

Synonym: ECS88_1493

Alternate gene names: NA

Gene position: NA

Preceding gene: 218558336

Following gene: 218558333

Centisome position: NA

GC content: NA

Gene sequence:

>3525_bases
ATGATTACTATTGACGGTAATGGCGCGGTTGCTTCGGTGGCGTTTCGCACCAGTGAAGTTATCGCCATCTACCCTATTAC
CCCCAGTTCCACGATGGCAGAACAGGCTGATGCATGGGCCGGAAACGGCTTGAAAAACGTTTGGGGAGACACACCACGCG
TGGTTGAAATGCAGTCGGAAGCGGGTGCTATCGCTACCGTGCATGGTGCTTTGCAAACTGGTGCCCTCTCAACATCGTTT
ACGTCATCGCAGGGTTTGCTGCTGATGATCCCAACGCTGTACAAACTGGCAGGCGAACTGACGCCGTTTGTCCTGCATGT
TGCGGCACGTACCGTTGCCACACATGCACTCTCTATTTTTGGCGATCATTCCGACGTTATGGCGGTGCGCCAGACGGGTT
GCGCGATGTTGTGTGCAGCAAGCGTCCAGGAAGCGCAAGACTTTGCTCTCATTTCGCACATCGCGACGCTGAAAAGCCGC
GTGCCATTTATTCATTTCTTTGATGGTTTCCGCACATCTCACGAAATCAATAAAATTGTCCCGCTGGCCGATGACACGAT
TCTTGAACTGATGCCGCAGGCAGAAATTGATGCTCATCGCGCCCGGGCACTCAACCCGGAACATCCGGTGATCCGCGGTA
CGTCCGCCAATCCTGACACTTATTTCCAGTCTCGCGAAGCCACCAACCCATGGTACAACGCGGTCTATGACCATGTTGAA
CAGGCGATGAATGATTTCGCTGCCGCGACAGGTCGTCATTATCAGCCGTTTGAGTATTACGGGCATCCGCAAGCGGAACG
GGTGATTATCCTGATGGGCTCAGCCATTGGCACATGTGAAGAAGTGGTTGATGAATTGCTGACCCGTGGCGAAAAAGTCG
GCGTGCTGAAAGTTCGCCTGTACCGCCCCTTCTCCGCCAAACACTTGCTGCAAGCTCTGCCGGGATCCGTGCGCAACGTA
GCGGTACTGGACAGAACCAAAGAACCCGGTGCCCAGGCAGAACCGCTCTATCTGGATGTGATGACCGCACTGGCAGAAGC
CTTTAATAATGGCGAGCGTGAAACCCTGCCCCGTGTCATTGGTGGGCGCTATGGTCTTTCATCCAAAGAATTTGGCCCGG
ACTGTGTACTGGCGGTATTTGCCGAGCTCAACGCGGCTAAACCGAAAGCGCGCTTTACGGTTGGTATTTACGATGATGTA
ACCAATCTGTCACTGCCGTTGCCGGAAAACACCCTACCAAACTCGGCGAAACTGGAAGCCTTGTTTTATGGCCTTGGTAG
TGATGGCAGCGTTTCCGCGACCAAAAACAATATCAAGATTATCGGAAATTCCACGCCGTGGTACGCACAGGGCTATTTTG
TTTACGACTCCAAAAAGGCGGGCGGCCTGACGGTTTCTCACCTTCGCGTGAGCGAACAGCCGATTCGTTCCGCTTATCTC
ATTTCCCAGGCTGATTTTGTTGGCTGCCACCAGTTGCAGTTTATCGATAAATATCAGATGGCTGAGCGTTTAAAACCTGG
CGGCATTTTCCTGCTCAACACGCCGTACAGCGCAGCTGAAGTGTGGTCGCGCTTGCCGCAGGAAGTTCAGGCCGTGCTAA
ACCAGAAAAAAGCGCGCTTCTATGTGATTAACGCGGCGAAAATCGCCCGCGAATGTGGCCTGGCGGCCCGTATTAATACC
GTCATGCAGATGGCTTTTTTCCATCTGACGCAGATTCTGCCTGGCGATAGCGCCCTGGCAGAATTGCAGGGTGCGATTGC
CAAAAGTTACAGTAGCAAAGGCCAGGATCTGGTGGAACGCAACTGGCAGGCTCTGGCGCTGGCACGTGAATCCGTAGAAG
AAGTTCCACTGCAGCCAGTTAATCCGCATAGCGCCAATCGACCGCCAGTGGTTTCCGATGCCGCTCCTGATTTCGTGAAA
ACCGTAACCGCTGCGATGCTCGCCGGGCTTGGCGACGCCCTCCCCGTTTCGGCGCTGCCGCCAGACGGCACCTGGCCGAT
GGGCACCACGCGCTGGGAAAAACGCAATATCGCCGAAGAGATCCCCATCTGGAAAGAGGAACTCTGTACCCAATGTAACC
ACTGTGTCGCCGCTTGCCCACACTCAGCTATTCGCGCAAAAGTGGTACCGCCTGAAGCGATGGAAAACGCCCCTGCCAGC
CTGCATTCGCTGGATGTGAAATCGCGTGATATGCGCGGGCAGAAATATGTCTTGCAGGTGGCTCCGGAAGATTGCACCGG
TTGTAACCTGTGCGTCGAAGTTTGCCCGGCGAAAGACCGTCAGAATCCAGAGATTAAAGCCATCAATATGATGTCGCGCC
TGGAACATGTCGAAGAAGAGAAAATCAATTACGATTTCTTCCTCAACCTGCCAGAAATCGACCGTAGCAAACTGGAACGT
ATTGATATTCGTACATCGCAGCTGATTACACCGCTGTTTGAATATTCCGGTGCTTGCTCCGGTTGTGGCGAGACGCCGTA
TATTAAATTGCTGACTCAGCTCTATGGCGACCGGATGTTGATCGCTAATGCCACTGGCTGTTCTTCAATATACGGCGGTA
ACCTGCCTTCAACACCATATACCACCGATGCCAATGGTCGTGGACCGGCATGGGCGAACTCGCTGTTTGAAGATAACGCC
GAATTTGGCCTTGGTTTCCGCCTGACGGTCGATCAACACCGTGTCCGCGTGCTGCGTCTGCTCGATCAATTTGCCGATAA
AATCCCGACGGAATTACTGACTGCGTTGAAATCAGACGCCACGCCAGAGGTTCGTCGTGCACAGGTTGCAGCTTTACGCC
AGCAACTCAACGATGTTGCCGAAGCACATGAACTGCTGCGTGACGCAGATGCACTGGTGGAAAAATCAATCTGGCTGATT
GGTGGCGATGGCTGGGCTTACGATATCGGCTTTGGCGGTCTGGATCATGTATTGAGTTTGACGGAAAACGTCAACATTCT
GGTGCTGGATACGCAATGCTATTCCAACACCGGTGGTCAGGCATCGAAAGCGACACCGCTGGGTGCAGTAACTAAGTTTG
GCGAGCATGGCAAACGTAAAGCGCGTAAAGATCTTGGCGTCAGTATGATGATGTACGGTCATGTTTATGTGGCGCAGATT
TCTCTCGGCGCGCAGTTGAACCAGACGGTGAAAGCGATTCAGGAAGCGGAAGCGTATCCGGGGCCATCGCTGATCATCGC
TTATAGCCCATGTGAAGAGCATGGTTACGATCTGGCACTCAGCCACGATCAGATGCGCCAACTCACTGCTACCGGCTTCT
GGCCGTTATATCGCTTCGATCCTCGTCGTGCCGATGAAGGCAAACTGCCGCTGGCGCTGGATTCACGCCCGCCGTCAGAA
GCACTGGAAGAAACGTTACTTCACGAGCAGCGTTTCCGTCGTCTGAATTCGCAGCAGCCAGAAGTGGCAGAACAGTTATG
GAAAGATGCTGCAGCTGATTTGCAAAAACGCTATGACTTCCTGGCACAAATGGCCGGAAAAGCGGAAAAAAGCAACACCG
ATTAA

Upstream 100 bases:

>100_bases
GCGAAAATGCAGAAGAAAGCCATTTGCTAAAATTGAACGATTACTACTGGGCGCGCAGCAATTTCGTGCGCCCCTCATTT
GCGCAATGTAAGGGTGTCAT

Downstream 100 bases:

>100_bases
ATGCTCTGGATAAGGATTATCCAATTCTAAAAAAAAGCCCGGACGACTGTTCGGGCTTGTCTTCTTATGTGTTGGAAAAT
CAGTAGCAATGCAATGGCCC

Product: 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1174_residues
MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSF
TSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAASVQEAQDFALISHIATLKSR
VPFIHFFDGFRTSHEINKIVPLADDTILELMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE
QAMNDFAAATGRHYQPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQALPGSVRNV
AVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDV
TNLSLPLPENTLPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYL
ISQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSAAEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINT
VMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVERNWQALALARESVEEVPLQPVNPHSANRPPVVSDAAPDFVK
TVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPAS
LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDFFLNLPEIDRSKLER
IDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNA
EFGLGFRLTVDQHRVRVLRLLDQFADKIPTELLTALKSDATPEVRRAQVAALRQQLNDVAEAHELLRDADALVEKSIWLI
GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMMMYGHVYVAQI
SLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSE
ALEETLLHEQRFRRLNSQQPEVAEQLWKDAAADLQKRYDFLAQMAGKAEKSNTD

Sequences:
NA

Specific function: NA

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA