Definition Escherichia coli S88, complete genome.
Accession NC_011742
Length 5,032,268

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The map label for this gene is yadE

Identifier: 218557073

GI number:

Start: 151111

End: 152340

Strand: Direct

Name: yadE

Synonym: ECS88_0140

Alternate gene names: NA

Gene position: NA

Preceding gene: 218557072

Following gene: 218557075

Centisome position: NA

GC content: NA

Gene sequence:

>1230_bases
ATGTACAAACAAGCTGTTATTCTCCTGCTGATGCTGTTTACCGCAAGTGTCAGTGCCGCGTTACCTGCCCGTTATATGCA
AACCATCGAAAATGCCGCGGTCTGGGCGCAAATTGGCGACAAAATGGTGACGGTAGGGAATATTCGGGCCGGACAAATCA
TTGCCGTGGAGCCCACTGCCGCAAGTTATTACGTATTTAATTTTGGCTTTGGTAAAGGGTTTATCGATAAAGGCCATCTC
GAGCCGGTTCAGGGGCGACAAAAAGTTGAAGATGGTTTGGGTGACCTCAACAAGCCGCTGAGTAATCAGAACTTAATAAC
CAGGAAAGATACGCCGGTTTATAACGCACCGAGTGTGGGCAGTGCGCCATTTGGAGTACTGGCGGACAATTTGCGCTACC
CGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATCAGATCCGTATTGGCGATCGACTGGCCTATATCAGC
GCGCTGGATGCCCAACCCGATAATGGCTTGCCGGTGCTAACCTATCACCATATTTTGCGCGACGAAGAAAACACCCGTTT
TCGCCATACTTCGACGACCACCTCGGTACGCGCTTTCAATAACCAGATGGCCTGGCTGCGCGACAGGGGATACGCGACAC
TGAGCATGGCGCAGCTGGAAGGTTACGTGAAGAATAAGATCAATCTCCCTGCGCGAGCGGTGGTAATTACCTTTGATGAT
GGCCTCAAGTCGGTGAGCCGCTATGCGTATCCTGTGTTGAAACAATATGGTATGAAGGCGACGGCGTTTATTGTTACCTC
GCGCATCAAACGTCACCCGCAGAAATGGAACCCAAAATCGCTGCAATTTATGAGCGTTTCTGAACTTAACGAAATTCGCG
ATGTATTTGATTTCCAGTCACATACTCATTTTTTGCATCGGATAGATGGTTATCGGCGGCCTATATTGCTGAGCCGTAGT
GAGCACAATATTCTGTTTGATTTTGCACGTTCACGCCGCGCTCTGGCGCAATTTAATCCACATGTTTTGTATCTTTCTTA
TCCATTTGGCGGATTTAATGACAAAGCCGTGAAGGCAGCAAAAGAAGCCGGATTTCACCTGGCGGTGACGACCATGAAAG
GCAAAGTAAAACCGGGGGATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGACGATGTCG
CGGCTGGTGAGTAACCAGCCGCAGGGATAA

Upstream 100 bases:

>100_bases
GCCTTTCGTCCTCAAACATAATTTGTATGAGTATTAACCCGCGATTCTGATGACGCTTTTGCTACAATAAAGGCGTTGTT
TCACCCTCGGTTATTTTTTC

Downstream 100 bases:

>100_bases
CAATCAGGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCGTTGTCGCCTTCAAAATAGGCGACGTTGGGTC
GCCAGGTGCGAGCTTCTTCA

Product: exported polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>409_residues
MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQIGDKMVTVGNIRAGQIIAVEPTAASYYVFNFGFGKGFIDKGHL
EPVQGRQKVEDGLGDLNKPLSNQNLITRKDTPVYNAPSVGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNKINLPARAVVITFDD
GLKSVSRYAYPVLKQYGMKATAFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQSHTHFLHRIDGYRRPILLSRS
EHNILFDFARSRRALAQFNPHVLYLSYPFGGFNDKAVKAAKEAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLETMS
RLVSNQPQG

Sequences:
NA

Specific function: NA

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA