Click here to switch to the map view.

The map label for this gene is gnsB [H]

Identifier: 218551650

GI number: 218551650

Start: 4530621

End: 4530887

Strand: Direct

Name: gnsB [H]

Synonym: EFER_4444

Alternate gene names: 218551650

Gene position: 4530621-4530887 (Clockwise)

Preceding gene: 218551649

Following gene: 218551651

Centisome position: 98.73

GC content: 31.84

Gene sequence:

>267_bases
TTGCGATGTTTCATCTTATCTTTTATACGTTTGCTCCATATAATTGACACTACTGTGTACCAGGAAAGTCATAACAGACT
AAAAGAGGAAATGATGAACATTGAAGAGTTAAAAACAAAAACAGAAGCAGATATTTCTGAATATATAACAAAAAAAATCA
TTGAGCTTAAGAAAAAGACCGGGAAAGAAGTTACCAATATCCAGTTTACTGCACGGGAAAAAATGACTGGTCTTGAAAGC
TATGATATCAAGATTGATTTAATCTAG

Upstream 100 bases:

>100_bases
GCAATGAGACTCTTGAATTGATTTGATTCTAATGCATTGATAATAAATGATAATCATTTTTATCTGTTTGTGTGAAATTT
AGACCGTCGTATGTTGATTA

Downstream 100 bases:

>100_bases
TATGTTTATAGTATTAGCATCAATTTCTCATCAGATGCTATTCAACAATACAAATTACCCATAAACCTCGTTTTTACGGG
GTTTTGTTATATTTAAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MRCFILSFIRLLHIIDTTVYQESHNRLKEEMMNIEELKTKTEADISEYITKKIIELKKKTGKEVTNIQFTAREKMTGLES
YDIKIDLI

Sequences:

>Translated_88_residues
MRCFILSFIRLLHIIDTTVYQESHNRLKEEMMNIEELKTKTEADISEYITKKIIELKKKTGKEVTNIQFTAREKMTGLES
YDIKIDLI
>Mature_88_residues
MRCFILSFIRLLHIIDTTVYQESHNRLKEEMMNIEELKTKTEADISEYITKKIIELKKKTGKEVTNIQFTAREKMTGLES
YDIKIDLI

Specific function: Overexpression increases levels of unsaturated fatty acids and suppresses both the temperature-sensitive fabA6 mutation and cold-sensitive secG null mutation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gns family [H]

Homologues:

Organism=Escherichia coli, GI87081932, Length=57, Percent_Identity=91.2280701754386, Blast_Score=102, Evalue=4e-24,
Organism=Escherichia coli, GI87081815, Length=57, Percent_Identity=64.9122807017544, Blast_Score=78, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012563 [H]

Pfam domain/function: PF08178 GnsAB [H]

EC number: NA

Molecular weight: Translated: 10454; Mature: 10454

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCFILSFIRLLHIIDTTVYQESHNRLKEEMMNIEELKTKTEADISEYITKKIIELKKKT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKEVTNIQFTAREKMTGLESYDIKIDLI
CCCHHCEEEHHHHHHCCCCCCCEEEECC
>Mature Secondary Structure
MRCFILSFIRLLHIIDTTVYQESHNRLKEEMMNIEELKTKTEADISEYITKKIIELKKKT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GKEVTNIQFTAREKMTGLESYDIKIDLI
CCCHHCEEEHHHHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 11544213 [H]