| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is uxaC [H]
Identifier: 218551598
GI number: 218551598
Start: 4486773
End: 4488185
Strand: Direct
Name: uxaC [H]
Synonym: EFER_4383
Alternate gene names: 218551598
Gene position: 4486773-4488185 (Clockwise)
Preceding gene: 218551585
Following gene: 218551599
Centisome position: 97.78
GC content: 53.43
Gene sequence:
>1413_bases ATGACTCCGTTTATGACTGAAGATTTCCTGTTAGATACCGAATTTGCCCGCCGCCTGTACCATGAATACGCCAAAGATCA GCCGATTTTTGACTACCACTGCCATTTGCCACCGCAGCAAATCGCGGAAGACTACCGTTTCAAAAACCTGTATGACATTT GGCTGAAAGGCGATCACTATAAATGGCGTGCAATGCGTACTAACGGTGTGGCAGAGCGTCTGTGTACTGGCGACGCATCT GACCGTGAGAAATTTGACGCATGGGCGGCAACGGTTCCTCACACTATCGGCAACCCGTTATACCACTGGACGCACCTGGA GCTGCGTCGCCCATTTGGTATTACAGGTAAACTGCTTTCTCCTTCTACTGCTGATGAAATCTGGAATCAGTGTAACGAAC TGCTGGCACAGGATAACTTCTCTGCGCGCGGCATCATGCAGCAGATGAACGTGAAAATGGTCGGCACCACCGACGATCCG ATCGATTCTCTGGAGCATCACGCAGAGATCGCCAAAGACGGCTCTTTCACCATTAAAGTGCTGCCGAGCTGGCGTCCGGA CAAAGCCTTCAACATCGAACAGGCGACCTTTAATGACTACATGGCGAAGCTGGGTGAAGTTTCCGATACGGACATTCGCC GCTTTGCTGATCTGCAAACTGCCCTGACCAAACGTCTGGATCACTTCGCCGCTCACGGCTGTAAAGTGTCTGACCACGCG CTGGACGTGGTGATGTTTGCAGAAGCGAACGAAGCGGAGCTGGACAGCATCCTGGCGCGCCGTCTGGCTGGCGAAACCCT GAGCGAGCACGAAGTGGCACAGTTCAAAACTGCGGTGCTGGTGTTCCTTGGTGCCGAATACGCGCGTCGCGGTTGGGTGC AGCAGTACCACATTGGCGCGCTGCGTAATAACAACCTGCGTCAGTTCAAACTGCTGGGGCCGGATGTAGGCTTTGACTCC ATTAATGACCGTCCGATGGCGGAAGAGTTGTCCAAGCTGCTGAGCAAACAGAACGAAGAAAACCTGCTACCGAAAACTAT TCTCTACTGCCTGAACCCGCGCGATAACGAAGTGCTGGGCACCATGATCGGTAACTTCCAGGGCGAAGGTATGCCGGGCA AAATGCAGTTCGGTTCCGGCTGGTGGTTTAACGACCAGAAAGACGGTATGGAACGTCAGATGACTCAACTGGCGCAGCTC GGTCTGCTGAGCCGCTTTGTCGGTATGCTGACTGACAGCCGTAGCTTCCTGTCATACACCCGTCACGAATACTTCCGCCG TATTCTGTGCCAGATGATCGGTCGCTGGGTGGAAGCGGGCGAAGCACCGGCGGACATCAACCTGCTGGGCGAGATGGTGA AAAATATTTGCTTTAACAATGCGCGTGACTACTTCGCCATTGAACTGAACTAA
Upstream 100 bases:
>100_bases CTAACTCACGAAAATAGCTTCGGACTATGGAAATTGGTGTGATAACTTTGTCAGCATCGCTATATAAGCAAGCTGACTCA CTCGTGAGAGGAAGACGATA
Downstream 100 bases:
>100_bases GGTCTGGGGTTGATATGCAATACATCAAGATCCATGCGCTGGATAACGTCGCGGTCGCTTTAGCTGATTTGGCTGAAGGC ACAGAAGTCAGTGTCGATAA
Product: glucuronate isomerase
Products: NA
Alternate protein names: Glucuronate isomerase; Uronic isomerase [H]
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MTPFMTEDFLLDTEFARRLYHEYAKDQPIFDYHCHLPPQQIAEDYRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDAS DREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLSPSTADEIWNQCNELLAQDNFSARGIMQQMNVKMVGTTDDP IDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADLQTALTKRLDHFAAHGCKVSDHA LDVVMFAEANEAELDSILARRLAGETLSEHEVAQFKTAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDS INDRPMAEELSKLLSKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQL GLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLGEMVKNICFNNARDYFAIELN
Sequences:
>Translated_470_residues MTPFMTEDFLLDTEFARRLYHEYAKDQPIFDYHCHLPPQQIAEDYRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDAS DREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLSPSTADEIWNQCNELLAQDNFSARGIMQQMNVKMVGTTDDP IDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADLQTALTKRLDHFAAHGCKVSDHA LDVVMFAEANEAELDSILARRLAGETLSEHEVAQFKTAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDS INDRPMAEELSKLLSKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQL GLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLGEMVKNICFNNARDYFAIELN >Mature_469_residues TPFMTEDFLLDTEFARRLYHEYAKDQPIFDYHCHLPPQQIAEDYRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDASD REKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLSPSTADEIWNQCNELLAQDNFSARGIMQQMNVKMVGTTDDPI DSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADLQTALTKRLDHFAAHGCKVSDHAL DVVMFAEANEAELDSILARRLAGETLSEHEVAQFKTAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSI NDRPMAEELSKLLSKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQLG LLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLGEMVKNICFNNARDYFAIELN
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1904
COG function: function code G; Glucuronate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uronate isomerase family [H]
Homologues:
Organism=Escherichia coli, GI2367192, Length=470, Percent_Identity=99.5744680851064, Blast_Score=984, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003766 - InterPro: IPR023177 [H]
Pfam domain/function: PF02614 UxaC [H]
EC number: =5.3.1.12 [H]
Molecular weight: Translated: 54001; Mature: 53870
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPFMTEDFLLDTEFARRLYHEYAKDQPIFDYHCHLPPQQIAEDYRFKNLYDIWLKGDHY CCCCCCHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCEEEEEECCCCE KWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLS EEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCEEEEEEEEECCCCCCCCCCC PSTADEIWNQCNELLAQDNFSARGIMQQMNVKMVGTTDDPIDSLEHHAEIAKDGSFTIKV CCHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEE LPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADLQTALTKRLDHFAAHGCKVSDHA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LDVVMFAEANEAELDSILARRLAGETLSEHEVAQFKTAVLVFLGAEYARRGWVQQYHIGA EEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLLSKQNEENLLPKTILYCLNPRDNEVLG HCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEECCCCCHHHH TMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQLGLLSRFVGMLTDSRSFLSYT HHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RHEYFRRILCQMIGRWVEAGEAPADINLLGEMVKNICFNNARDYFAIELN HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC >Mature Secondary Structure TPFMTEDFLLDTEFARRLYHEYAKDQPIFDYHCHLPPQQIAEDYRFKNLYDIWLKGDHY CCCCCHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCEEEEEECCCCE KWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYHWTHLELRRPFGITGKLLS EEEEECCCHHHHHHHCCCCCCHHHHHHHHHHCCHHHCCCCEEEEEEEEECCCCCCCCCCC PSTADEIWNQCNELLAQDNFSARGIMQQMNVKMVGTTDDPIDSLEHHAEIAKDGSFTIKV CCHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEE LPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADLQTALTKRLDHFAAHGCKVSDHA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LDVVMFAEANEAELDSILARRLAGETLSEHEVAQFKTAVLVFLGAEYARRGWVQQYHIGA EEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH LRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLLSKQNEENLLPKTILYCLNPRDNEVLG HCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEECCCCCHHHH TMIGNFQGEGMPGKMQFGSGWWFNDQKDGMERQMTQLAQLGLLSRFVGMLTDSRSFLSYT HHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RHEYFRRILCQMIGRWVEAGEAPADINLLGEMVKNICFNNARDYFAIELN HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA