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The map label for this gene is yjcH [H]

Identifier: 218551513

GI number: 218551513

Start: 4404231

End: 4404710

Strand: Direct

Name: yjcH [H]

Synonym: EFER_4297

Alternate gene names: 218551513

Gene position: 4404231-4404710 (Clockwise)

Preceding gene: 218551512

Following gene: 218551514

Centisome position: 95.98

GC content: 50.83

Gene sequence:

>480_bases
GTGGGAAAGGGCAAATATAAAAATTCTCCTAAGTATTTCGCGTTGCAGGCAGGAAGCAAGCGAGCATCTCCCCAGGAGCA
TAGAAAACTATGTGACTGGGGGAGGCGAGTGCGGCTGACGAACCTGCGGCGTGAAAGACGACGGGGAACCTCTGGAGAAT
CTGTGATGAATGGCACTATTTATCAGCGGATAGAAGACAATGCGCATTTCAGGGAGTTAGTCGAAAAACGGCAACGGTTT
GCCACCATCCTGTCGATTATTATGCTGGCAGTTTATATCGGCTTTATTTTACTGATCGCCTTCGCGCCCGGCTGGCTGGG
CACTCCGCTGAATCCGAACACCAGCGTCACACGCGGTATTCCGATTGGTGTTGGAGTGATCGTGATCTCCTTTGTTCTCA
CCGGTATCTACATCTGGCGGGCGAACGGCGAATTCGACCGTCTTAATAATGAAGTCCTGCATGAGGTACAAGCATCATGA

Upstream 100 bases:

>100_bases
GCTGCTTGAAGAGAAGCAGGCTATCGCGATGCCATCGTAACCCACCATTGCCGGATGTGGCGTAAACACCTTATCCGGTC
TACACGCCCCTTTCTTTATA

Downstream 100 bases:

>100_bases
AAAGAGTTCTGACGGCGCTTGCCGCCACACTCCCTTTCGCAGCTAACGCCGCGGATGCTATTAGCGGGGCCGTAGAGCGC
CAGCCAACGAACTGGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MGKGKYKNSPKYFALQAGSKRASPQEHRKLCDWGRRVRLTNLRRERRRGTSGESVMNGTIYQRIEDNAHFRELVEKRQRF
ATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS

Sequences:

>Translated_159_residues
MGKGKYKNSPKYFALQAGSKRASPQEHRKLCDWGRRVRLTNLRRERRRGTSGESVMNGTIYQRIEDNAHFRELVEKRQRF
ATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS
>Mature_158_residues
GKGKYKNSPKYFALQAGSKRASPQEHRKLCDWGRRVRLTNLRRERRRGTSGESVMNGTIYQRIEDNAHFRELVEKRQRFA
TILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=104, Percent_Identity=100, Blast_Score=212, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 18059; Mature: 17928

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKGKYKNSPKYFALQAGSKRASPQEHRKLCDWGRRVRLTNLRRERRRGTSGESVMNGTI
CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHCCHH
YQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKGKYKNSPKYFALQAGSKRASPQEHRKLCDWGRRVRLTNLRRERRRGTSGESVMNGTI
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHCCHH
YQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLIAFAPGWLGTPLNPNTSVTRGI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQAS
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]