Click here to switch to the map view.

The map label for this gene is cbrC [H]

Identifier: 218551250

GI number: 218551250

Start: 4118262

End: 4118843

Strand: Direct

Name: cbrC [H]

Synonym: EFER_4015

Alternate gene names: 218551250

Gene position: 4118262-4118843 (Clockwise)

Preceding gene: 218551249

Following gene: 218551278

Centisome position: 89.75

GC content: 47.42

Gene sequence:

>582_bases
ATGACTCAAAATATCAGGCCGTTACCCCTATTCAAATATCATCCCAAGCCACTGGAAACAGGCGCATTTGAGCAGGATAA
AATCGTAGAGTGCGACTGCTGTGAACAGCCAACATCGGTCTATTACACGGGTCCATTTTTCAGCGTTGATGATATTGAAT
ATCTCTGTCCGTGGTGTATTGCGGATGGTTCTGCGGCTAAAAAGTTTGCAGGTAGTTTTCAGGATAAAGCCTCCATTGAG
GGCGTCGGGACAACTTATTACGACAATGATGGAACCGCCACAACGCATTCTCTCTCGAATGATGCCCTTGAAGAATTGCT
GACCCGGACACCTGGCTATTGCGGGTGGCAACAGGAGCATTGGCTCACGCATTGTGGGGAACTCTGCGCTTTTGTTGGTT
ACGTCGGCTGGGATGAAATAAAAGATCGTCTCGATGAATTTGCACATCTTGAAGATGACTGTGATTCATTCATACGTTAC
GAACACCTGCAAGAATGCCTGAAAAACGGTGGTTATTGTCAGGGTTATCTCTTCCGCTGTCTCCACTGCGGCAAGCTGAG
ACTGTGGGGGGATTTTTCGTAG

Upstream 100 bases:

>100_bases
CCGTCTACCCGGATTGGATATTTCATGTCCTGAAACAGACTCTTTAAGCTAAGCAGGATGCTTTATCTTTGGGCTACTCA
AAAGCAGACAGGATGCTTCT

Downstream 100 bases:

>100_bases
TTATTTAAATAAAAAAAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATATTTTAAGCTAATTCTGCGGTAGCGGCT
TTATCAGCGATAACCATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: CreB-regulated gene C protein [H]

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTQNIRPLPLFKYHPKPLETGAFEQDKIVECDCCEQPTSVYYTGPFFSVDDIEYLCPWCIADGSAAKKFAGSFQDKASIE
GVGTTYYDNDGTATTHSLSNDALEELLTRTPGYCGWQQEHWLTHCGELCAFVGYVGWDEIKDRLDEFAHLEDDCDSFIRY
EHLQECLKNGGYCQGYLFRCLHCGKLRLWGDFS

Sequences:

>Translated_193_residues
MTQNIRPLPLFKYHPKPLETGAFEQDKIVECDCCEQPTSVYYTGPFFSVDDIEYLCPWCIADGSAAKKFAGSFQDKASIE
GVGTTYYDNDGTATTHSLSNDALEELLTRTPGYCGWQQEHWLTHCGELCAFVGYVGWDEIKDRLDEFAHLEDDCDSFIRY
EHLQECLKNGGYCQGYLFRCLHCGKLRLWGDFS
>Mature_192_residues
TQNIRPLPLFKYHPKPLETGAFEQDKIVECDCCEQPTSVYYTGPFFSVDDIEYLCPWCIADGSAAKKFAGSFQDKASIEG
VGTTYYDNDGTATTHSLSNDALEELLTRTPGYCGWQQEHWLTHCGELCAFVGYVGWDEIKDRLDEFAHLEDDCDSFIRYE
HLQECLKNGGYCQGYLFRCLHCGKLRLWGDFS

Specific function: Unknown

COG id: COG3196

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0167 family [H]

Homologues:

Organism=Escherichia coli, GI1790153, Length=195, Percent_Identity=72.3076923076923, Blast_Score=290, Evalue=3e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005363 [H]

Pfam domain/function: PF03691 UPF0167 [H]

EC number: NA

Molecular weight: Translated: 22024; Mature: 21892

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNIRPLPLFKYHPKPLETGAFEQDKIVECDCCEQPTSVYYTGPFFSVDDIEYLCPWCI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHH
ADGSAAKKFAGSFQDKASIEGVGTTYYDNDGTATTHSLSNDALEELLTRTPGYCGWQQEH
CCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEHHHCCHHHHHHHHHCCCCCCCCCHHH
WLTHCGELCAFVGYVGWDEIKDRLDEFAHLEDDCDSFIRYEHLQECLKNGGYCQGYLFRC
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LHCGKLRLWGDFS
HHCCCEEEECCCC
>Mature Secondary Structure 
TQNIRPLPLFKYHPKPLETGAFEQDKIVECDCCEQPTSVYYTGPFFSVDDIEYLCPWCI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHH
ADGSAAKKFAGSFQDKASIEGVGTTYYDNDGTATTHSLSNDALEELLTRTPGYCGWQQEH
CCCHHHHHHHCCCCCCCCCCCCCCEEECCCCCEEHHHCCHHHHHHHHHCCCCCCCCCHHH
WLTHCGELCAFVGYVGWDEIKDRLDEFAHLEDDCDSFIRYEHLQECLKNGGYCQGYLFRC
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LHCGKLRLWGDFS
HHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]