| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218551187
Identifier: 218551187
GI number: 218551187
Start: 4055128
End: 4055625
Strand: Direct
Name: 218551187
Synonym: EFER_3952
Alternate gene names: NA
Gene position: 4055128-4055625 (Clockwise)
Preceding gene: 218551186
Following gene: 218551188
Centisome position: 88.37
GC content: 35.14
Gene sequence:
>498_bases GTGGGGCATGGCACTTGTAAAGCAGCCAAAAGCGCGAGGCATTTAATTGAAAGCAAAGAGAAAAACAGAAGTAGTCGAGT CAAGGTCTTTAGTACGCGTATTAATTTGAGTCATCCAGCGGCATCCTGGCAAGCAACTCAAACTTGCGCTAACAATATAT TCAATCTGTTTCAAAACAATAATGCCCTTTATTTATTCGAAAACGATAATAAAATTGAACTGCGTATGGGGTATGATTCT TTTTTCTCTATTGAAACGATTGATAAAATTCACAAAGAAAACATCAAAGAAATCAAACTAAAAAATGAGACAACATATGT TTCCCTGCCTAATCCAACCATTTTAATAACCACGACATCAACACCTGAACGACAGTTTTCTATTTCTGTTCTGGATGATG GCAACAAAGAAAATTTACCTACCGATACCGCACCTTGTTTTACAATTGATATTCCTGATGAATATACTAAAGCCATAGAA CTATTGAACATTAAATAA
Upstream 100 bases:
>100_bases CACAAGGATTGTCATCATCAAACTCATCGGAACGATTTTTTCTATCGCCATTGGTGTAATACTGATAGTAAGTATCCTTT CAGGAGATTACTTTTGCCGT
Downstream 100 bases:
>100_bases TTAAATTTCATATTGCGTTTTTAGTGAGATTTTTTAAATGCCATATGAATAATTGTTATATGTCATTATTTCACCCATTC ACTAAAACTGAATGATTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MGHGTCKAAKSARHLIESKEKNRSSRVKVFSTRINLSHPAASWQATQTCANNIFNLFQNNNALYLFENDNKIELRMGYDS FFSIETIDKIHKENIKEIKLKNETTYVSLPNPTILITTTSTPERQFSISVLDDGNKENLPTDTAPCFTIDIPDEYTKAIE LLNIK
Sequences:
>Translated_165_residues MGHGTCKAAKSARHLIESKEKNRSSRVKVFSTRINLSHPAASWQATQTCANNIFNLFQNNNALYLFENDNKIELRMGYDS FFSIETIDKIHKENIKEIKLKNETTYVSLPNPTILITTTSTPERQFSISVLDDGNKENLPTDTAPCFTIDIPDEYTKAIE LLNIK >Mature_164_residues GHGTCKAAKSARHLIESKEKNRSSRVKVFSTRINLSHPAASWQATQTCANNIFNLFQNNNALYLFENDNKIELRMGYDSF FSIETIDKIHKENIKEIKLKNETTYVSLPNPTILITTTSTPERQFSISVLDDGNKENLPTDTAPCFTIDIPDEYTKAIEL LNIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18741; Mature: 18610
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHGTCKAAKSARHLIESKEKNRSSRVKVFSTRINLSHPAASWQATQTCANNIFNLFQNN CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC NALYLFENDNKIELRMGYDSFFSIETIDKIHKENIKEIKLKNETTYVSLPNPTILITTTS CEEEEEECCCEEEEEECCCCEEEHHHHHHHHHCCHHEEEEECCEEEEECCCCEEEEEECC TPERQFSISVLDDGNKENLPTDTAPCFTIDIPDEYTKAIELLNIK CCCCEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHEEEECCC >Mature Secondary Structure GHGTCKAAKSARHLIESKEKNRSSRVKVFSTRINLSHPAASWQATQTCANNIFNLFQNN CCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCC NALYLFENDNKIELRMGYDSFFSIETIDKIHKENIKEIKLKNETTYVSLPNPTILITTTS CEEEEEECCCEEEEEECCCCEEEHHHHHHHHHCCHHEEEEECCEEEEECCCCEEEEEECC TPERQFSISVLDDGNKENLPTDTAPCFTIDIPDEYTKAIELLNIK CCCCEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA