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The map label for this gene is ybhA [H]

Identifier: 218551139

GI number: 218551139

Start: 3999624

End: 4000319

Strand: Direct

Name: ybhA [H]

Synonym: EFER_3900

Alternate gene names: 218551139

Gene position: 3999624-4000319 (Clockwise)

Preceding gene: 218551138

Following gene: 218551141

Centisome position: 87.16

GC content: 48.42

Gene sequence:

>696_bases
ATGATCTGCCGGTTAATCGTGCTCGATTTAGACGGCACATTGCTGAACAGCAAGAAGATGATTTCCCCTGCGTCTGTTTC
GGCACTGCAAAGCGCGCAACAAACAGGCGTGAAAATTATTCTCGCCTCCGGACGTTCGCACAGCGAAGCCCTGCCTTATT
ACCAACAATTGCAGTTAACCGAGCCGATGATTTGCTGTAACGGCAGCTATCTTTATCATCCGCGCCAGCGGCAAATATTG
CGTCCGCTGGCGCTTGATATCCACAAGGTGGAACAACTACGACGCTGGTTTTCACAACAAATATTGCAGCCAAATATTTA
TACGTACGATGATTTTGTTTTGCAGATTAGCCTGATACACCGCAAGGCTTCGTTATTGCGCCAGACAGAGGAGTTTGCCC
GGCAAGAACTATCGCTAAACTGTAGTTGGTCTTGGCATCATCAACTGGATATTACTCAGGCGGGGTGCAATAAAGGCAAA
AGTCTGCTCTGGTATGCCCAGCAGCAAAATATCGCACTGGATGAAATTATTGCCTTTGGCGACAACGATAATGATGCGGG
GATGCTGCGGATGGTAGGCAAAGGGATTGCGATGGGCAATGGCAGTTCGCTGGCAAAAGTCAGTGCTGACCGCGTTATCG
GTCACAACAACACAGATGCTATTGCGGATTTTCTTGATGCACAGGGTTTCAGATGA

Upstream 100 bases:

>100_bases
TGTCCAGGCACTGTCACTGTTATCTGGCTTATCATCTGCGTGAGGATATTCCGGCCCTCTCACAATTAGACGCTGAACGC
TGTTTTCGGATCTTCTCGTT

Downstream 100 bases:

>100_bases
CGCCTGATGCGATGCTGACGCATCTTATCAGGCCTACAAAAGCAAAAAACCTGCCATCGCTGGCAGGTTTTTTATGACTA
AAAAACGAAATTAATCGTCT

Product: phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MICRLIVLDLDGTLLNSKKMISPASVSALQSAQQTGVKIILASGRSHSEALPYYQQLQLTEPMICCNGSYLYHPRQRQIL
RPLALDIHKVEQLRRWFSQQILQPNIYTYDDFVLQISLIHRKASLLRQTEEFARQELSLNCSWSWHHQLDITQAGCNKGK
SLLWYAQQQNIALDEIIAFGDNDNDAGMLRMVGKGIAMGNGSSLAKVSADRVIGHNNTDAIADFLDAQGFR

Sequences:

>Translated_231_residues
MICRLIVLDLDGTLLNSKKMISPASVSALQSAQQTGVKIILASGRSHSEALPYYQQLQLTEPMICCNGSYLYHPRQRQIL
RPLALDIHKVEQLRRWFSQQILQPNIYTYDDFVLQISLIHRKASLLRQTEEFARQELSLNCSWSWHHQLDITQAGCNKGK
SLLWYAQQQNIALDEIIAFGDNDNDAGMLRMVGKGIAMGNGSSLAKVSADRVIGHNNTDAIADFLDAQGFR
>Mature_231_residues
MICRLIVLDLDGTLLNSKKMISPASVSALQSAQQTGVKIILASGRSHSEALPYYQQLQLTEPMICCNGSYLYHPRQRQIL
RPLALDIHKVEQLRRWFSQQILQPNIYTYDDFVLQISLIHRKASLLRQTEEFARQELSLNCSWSWHHQLDITQAGCNKGK
SLLWYAQQQNIALDEIIAFGDNDNDAGMLRMVGKGIAMGNGSSLAKVSADRVIGHNNTDAIADFLDAQGFR

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates pyridoxalphosphate and erythrose 4-phosphate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=267, Percent_Identity=33.7078651685393, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI48994981, Length=261, Percent_Identity=25.6704980842912, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001757
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR006380 [H]

Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]

EC number: NA

Molecular weight: Translated: 26015; Mature: 26015

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICRLIVLDLDGTLLNSKKMISPASVSALQSAQQTGVKIILASGRSHSEALPYYQQLQLT
CEEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHCC
EPMICCNGSYLYHPRQRQILRPLALDIHKVEQLRRWFSQQILQPNIYTYDDFVLQISLIH
CCEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHH
RKASLLRQTEEFARQELSLNCSWSWHHQLDITQAGCNKGKSLLWYAQQQNIALDEIIAFG
HHHHHHHHHHHHHHHHHEECCEEEEEEEEEEEHHCCCCCCEEEEEECCCCCCHHHHEEEC
DNDNDAGMLRMVGKGIAMGNGSSLAKVSADRVIGHNNTDAIADFLDAQGFR
CCCCCCHHHHHHHCCEEECCCCCEEHHHHHHEECCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MICRLIVLDLDGTLLNSKKMISPASVSALQSAQQTGVKIILASGRSHSEALPYYQQLQLT
CEEEEEEEECCCCEECCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHCC
EPMICCNGSYLYHPRQRQILRPLALDIHKVEQLRRWFSQQILQPNIYTYDDFVLQISLIH
CCEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHH
RKASLLRQTEEFARQELSLNCSWSWHHQLDITQAGCNKGKSLLWYAQQQNIALDEIIAFG
HHHHHHHHHHHHHHHHHEECCEEEEEEEEEEEHHCCCCCCEEEEEECCCCCCHHHHEEEC
DNDNDAGMLRMVGKGIAMGNGSSLAKVSADRVIGHNNTDAIADFLDAQGFR
CCCCCCHHHHHHHCCEEECCCCCEEHHHHHHEECCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7665460; 8564363; 8905232; 9278503 [H]