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The map label for this gene is yiiX [H]

Identifier: 218551078

GI number: 218551078

Start: 3931393

End: 3932001

Strand: Direct

Name: yiiX [H]

Synonym: EFER_3834

Alternate gene names: 218551078

Gene position: 3931393-3932001 (Clockwise)

Preceding gene: 218551077

Following gene: 218551079

Centisome position: 85.68

GC content: 52.05

Gene sequence:

>609_bases
ATGAAATACAGGCTACTGATCCTCAGCCTGCTGGTTTCTATGCCTGCCCTTGCCTGGCAGCCGGAAACTGGCGACATCAT
CTTTCAGATCTCTCGCTCATCGCAAAGTAAAGCAATCCAACTGGCGACCCATTCCGATTACAGCCATTCCGGTATGCTGG
TGATGCGTAACAAAAAGCCCTACGTCTTTGAAGCAGTCGGCCCGGTGAAATACACCCCGCTCAAGCAGTGGATCGCCCAC
GGTGAAGATGGCAAATACATTGTTCGCCGCGTTGAAGGTGGGCTGAATACCGAACAACAGCAAAAACTGGCGCAAACGGC
AAAACGTTATCTCGGCAAACCGTACGATTTCAGCTTCTCGTGGAGCGACGATCGCCAGTACTGTTCGGAAGTGGTGTGGA
AGGTTTACCAGAACGCACTGGGAATGCGCGTGGGTGAACAGCAAAAACTGAAAGAGTTCGATCTCAGCAACCCGCTGGTT
CAGGCGAAGCTCAAAGAACGTTACGGGAAAAATATTCCGCTTGAGGAAACGGTGGTCTCGCCACAAGCCGTTTTCGATGC
GCCACAACTCACCACAGTCGCCAAAGAATGGCCGCTGTTTTCCTGGTAA

Upstream 100 bases:

>100_bases
TGCGTGAGATGGGGATTAACCCGGAAACGTGGGAATACTAAAGCGGAAAAGAGCGGCGCGGAGTTAACCAGCCGCTTTTT
TCATACATGGACGTTTAACT

Downstream 100 bases:

>100_bases
TGGATGATGAAAAAAATAATTCCCGCCGTAGTCTGTTTGTTGCTTTGTAGTTGCACGACCTTTCCGCAAGCTGTCGCTCC
GGTAAACAATGACTTTGCAG

Product: peptidoglycan peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKYRLLILSLLVSMPALAWQPETGDIIFQISRSSQSKAIQLATHSDYSHSGMLVMRNKKPYVFEAVGPVKYTPLKQWIAH
GEDGKYIVRRVEGGLNTEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLV
QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW

Sequences:

>Translated_202_residues
MKYRLLILSLLVSMPALAWQPETGDIIFQISRSSQSKAIQLATHSDYSHSGMLVMRNKKPYVFEAVGPVKYTPLKQWIAH
GEDGKYIVRRVEGGLNTEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLV
QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW
>Mature_202_residues
MKYRLLILSLLVSMPALAWQPETGDIIFQISRSSQSKAIQLATHSDYSHSGMLVMRNKKPYVFEAVGPVKYTPLKQWIAH
GEDGKYIVRRVEGGLNTEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLV
QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yebB [H]

Homologues:

Organism=Escherichia coli, GI1790372, Length=202, Percent_Identity=93.5643564356436, Blast_Score=377, Evalue=1e-106,
Organism=Escherichia coli, GI87081991, Length=180, Percent_Identity=29.4444444444444, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23220; Mature: 23220

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRLLILSLLVSMPALAWQPETGDIIFQISRSSQSKAIQLATHSDYSHSGMLVMRNKKP
CCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCC
YVFEAVGPVKYTPLKQWIAHGEDGKYIVRRVEGGLNTEQQQKLAQTAKRYLGKPYDFSFS
EEEEECCCCEECHHHHHHHCCCCCHHHHEEHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
WSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERYGKNIPLEETVVS
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCC
PQAVFDAPQLTTVAKEWPLFSW
CHHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MKYRLLILSLLVSMPALAWQPETGDIIFQISRSSQSKAIQLATHSDYSHSGMLVMRNKKP
CCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCEEEEECCCC
YVFEAVGPVKYTPLKQWIAHGEDGKYIVRRVEGGLNTEQQQKLAQTAKRYLGKPYDFSFS
EEEEECCCCEECHHHHHHHCCCCCHHHHEEHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
WSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERYGKNIPLEETVVS
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHCC
PQAVFDAPQLTTVAKEWPLFSW
CHHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503; 7868617 [H]