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The map label for this gene is yijF [H]

Identifier: 218551064

GI number: 218551064

Start: 3912621

End: 3913238

Strand: Direct

Name: yijF [H]

Synonym: EFER_3818

Alternate gene names: 218551064

Gene position: 3912621-3913238 (Clockwise)

Preceding gene: 218551063

Following gene: 218551068

Centisome position: 85.27

GC content: 51.94

Gene sequence:

>618_bases
ATGAAAGCTTCACTGGCGTTGTTCAGTCTTCTGACGGTATTTACCAGTTACTCCTTAAAATCTCCCGCTGTTCCACCAAC
CGTGGTACAAATCCAGGCCAACACCAATCTTGCCATCGCAGACGGTGCCAGACAGCAAATTGGCAGCACGCTATTTTACG
ATCCGGCGTATGTGCAGCTTACTTATCCTGGCGGTGATGTCCCACAAGAACGCGGTGTATGTTCCGATGTGGTGATCCGT
GCTCTGCGCAGCCAGAAGGTCGATTTGCAGAAACTGGTTCACGAAGATATGGCGAAGAATTTTGCCGATTATCCGCAAAA
GTGGAAGTTAAAGCGCCCGGACAGCAACATCGATCACCGTCGGGTGCCTAATCTGGAAACCTGGTTTACCCGCCACGATA
AAACGCGCCCCACCAGCAAAAACGCCAGTGACTACCAAGCGGGCGATATTGTCTCCTGGCGATTAGATAATGGGCTGGCA
CATATTGGGGTGGTTTCAGATGGCTTCGCCCGCGACGGTACGCCGCTGGTGATACATAACATTGGCGCAGGCGCGCAGGA
AGAAGACGTGCTGTTTAGTTGGCAGATGGTGGGGCACTATCGGTATTTTGCTAAATGA

Upstream 100 bases:

>100_bases
GTCAGCGGGAGTTTTTTATCCGCTTCCGGACATTTCCCTCACAGAACATTCAAACGCTCTGAAGGTCGAATCTGTGAATA
TTTTTTCACGGACGAAACAG

Downstream 100 bases:

>100_bases
GCGCTCGCCCCACCTGTAAAAAATTCAGATCCTTTTTACGCTGACGGCTTCTTTTTTCTTACGGCTCACCAGCGCCAGTG
CCAGCACAATCAGCACAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKASLALFSLLTVFTSYSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIR
ALRSQKVDLQKLVHEDMAKNFADYPQKWKLKRPDSNIDHRRVPNLETWFTRHDKTRPTSKNASDYQAGDIVSWRLDNGLA
HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWQMVGHYRYFAK

Sequences:

>Translated_205_residues
MKASLALFSLLTVFTSYSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIR
ALRSQKVDLQKLVHEDMAKNFADYPQKWKLKRPDSNIDHRRVPNLETWFTRHDKTRPTSKNASDYQAGDIVSWRLDNGLA
HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWQMVGHYRYFAK
>Mature_205_residues
MKASLALFSLLTVFTSYSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQLTYPGGDVPQERGVCSDVVIR
ALRSQKVDLQKLVHEDMAKNFADYPQKWKLKRPDSNIDHRRVPNLETWFTRHDKTRPTSKNASDYQAGDIVSWRLDNGLA
HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWQMVGHYRYFAK

Specific function: Unknown

COG id: COG3738

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790380, Length=205, Percent_Identity=95.609756097561, Blast_Score=395, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009706
- ProDom:   PD357862 [H]

Pfam domain/function: PF06940 DUF1287 [H]

EC number: NA

Molecular weight: Translated: 22934; Mature: 22934

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKASLALFSLLTVFTSYSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQL
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCHHHHCCEEEECCEEEEE
TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFADYPQKWKLKRPDSNIDHR
ECCCCCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
RVPNLETWFTRHDKTRPTSKNASDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCEEEEE
IGAGAQEEDVLFSWQMVGHYRYFAK
CCCCCCCCCEEEEEEEHHHHHHHCC
>Mature Secondary Structure
MKASLALFSLLTVFTSYSLKSPAVPPTVVQIQANTNLAIADGARQQIGSTLFYDPAYVQL
CCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCHHHHCCEEEECCEEEEE
TYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFADYPQKWKLKRPDSNIDHR
ECCCCCCCHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
RVPNLETWFTRHDKTRPTSKNASDYQAGDIVSWRLDNGLAHIGVVSDGFARDGTPLVIHN
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCEEEEE
IGAGAQEEDVLFSWQMVGHYRYFAK
CCCCCCCCCEEEEEEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]