Click here to switch to the map view.

The map label for this gene is yihE [H]

Identifier: 218550901

GI number: 218550901

Start: 3709651

End: 3710637

Strand: Reverse

Name: yihE [H]

Synonym: EFER_3617

Alternate gene names: 218550901

Gene position: 3710637-3709651 (Counterclockwise)

Preceding gene: 218550902

Following gene: 218550900

Centisome position: 80.86

GC content: 48.53

Gene sequence:

>987_bases
ATGAACAACAGCGCTTTTACTTTCCAGACACTACACCCGGATACCATCATGGACGCTCTGTTTGAGCATGGGATCCGGGT
GGATTCCGGTCTTACCCCGCTTAACAGCTATGAAAACCGTGTCTATCAATTTCAGGACGAAGAGCGTCGACGTTTTGTCG
TCAAATTTTATCGCCCTGAACGTTGGACAGCCGATCAAATCCTCGAAGAACATCAATTTGCGTTGCAGCTGGTTAACGAT
GAAGTTCCGGTCGCAGCACCTGTGGCCTTTAATGGTCAGACTTTATTGAATCATCTGGGATTTTATTTCGCTGTTTTTCC
AAGCGTCGGTGGTCGCCAGTTCGAAGCTGATAATATCGATCAGATGGAAGCGGTTGGGCGTTATTTAGGGCGTATGCACC
AGACGGGGCGTAAACAGCTTTTTATCCATCGCCCGACCATCGGTCTGAATGAATACCTCATTGAGCCACGCAAGCTGTTT
GAGGACGCTACATTGATACCTTCCGGGTTAAAAGCGGCATTCCTGAAAGCGACAGATGAGCTGATCGCCGCCGTTACAGC
ACACTGGCGGGAAGATTTCACCGTTCTGCGGCTACATGGAGACTGCCACGCCGGGAATATTCTCTGGCGCGATGGTCCAA
TGTTCGTTGATCTGGATGATGCACGTAATGGTCCGGCTATTCAGGATTTGTGGATGTTGCTCAATGGCGATAAAGCTGAG
CAGCGGATGCAACTGGAAACTATTATTGAGGCTTATGAAGAATTTAGCGAGTTCGATATCGCTGAAATCGGACTGATTGA
ACCTTTACGCGCCATGCGTTTGGTTTATTATCTTGCCTGGCTAATGCGGCGTTGGGCTGATCCCGCGTTCCCGAAAAATT
TCCCGTGGTTAACCGGGGAAGATTACTGGCTGCGACAGACGGCGACTTTTATAGAACAGGCAAAAGTTCTACAAGAACCC
CCTTTGCAATTAACACCTATGTATTAA

Upstream 100 bases:

>100_bases
GCACGTGGCGTAATTAAAGAGTAAAAGCTTGTAAGCGGCGCAACCAAAATCATCGTGAAATGATATCCTTCATCATTCGT
AATGTTTTCCGGATGATGGG

Downstream 100 bases:

>100_bases
TCGGAGAGAGTAGATCATGAAAAAGATTTGGCTGGCGCTGGCTGGTTTAGTTTTAGCGTTTAGCGCATCGGCGGCGCAGT
ATGAAGATGGTAAACAGTAC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNNSAFTFQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEERRRFVVKFYRPERWTADQILEEHQFALQLVND
EVPVAAPVAFNGQTLLNHLGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF
EDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGDKAE
QRMQLETIIEAYEEFSEFDIAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEP
PLQLTPMY

Sequences:

>Translated_328_residues
MNNSAFTFQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEERRRFVVKFYRPERWTADQILEEHQFALQLVND
EVPVAAPVAFNGQTLLNHLGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF
EDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGDKAE
QRMQLETIIEAYEEFSEFDIAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEP
PLQLTPMY
>Mature_328_residues
MNNSAFTFQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEERRRFVVKFYRPERWTADQILEEHQFALQLVND
EVPVAAPVAFNGQTLLNHLGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF
EDATLIPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGDKAE
QRMQLETIIEAYEEFSEFDIAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEP
PLQLTPMY

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=98.780487804878, Blast_Score=672, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38146; Mature: 38146

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSAFTFQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEERRRFVVKFYRPE
CCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEECCCHHHHEEEEEEECCC
RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHLGFYFAVFPSVGGRQFEADNID
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEECCCCHH
QMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDE
HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHH
LIAAVTAHWREDFTVLRLHGDCHAGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGDKAE
HHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCHHH
QRMQLETIIEAYEEFSEFDIAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DYWLRQTATFIEQAKVLQEPPLQLTPMY
CHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNNSAFTFQTLHPDTIMDALFEHGIRVDSGLTPLNSYENRVYQFQDEERRRFVVKFYRPE
CCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEECCCHHHHEEEEEEECCC
RWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHLGFYFAVFPSVGGRQFEADNID
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCEECCCCHH
QMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDE
HHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHH
LIAAVTAHWREDFTVLRLHGDCHAGNILWRDGPMFVDLDDARNGPAIQDLWMLLNGDKAE
HHHHHHHHHHCCCEEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCHHH
QRMQLETIIEAYEEFSEFDIAEIGLIEPLRAMRLVYYLAWLMRRWADPAFPKNFPWLTGE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
DYWLRQTATFIEQAKVLQEPPLQLTPMY
CHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]