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The map label for this gene is yihF [H]

Identifier: 218550899

GI number: 218550899

Start: 3707425

End: 3708843

Strand: Reverse

Name: yihF [H]

Synonym: EFER_3615

Alternate gene names: 218550899

Gene position: 3708843-3707425 (Counterclockwise)

Preceding gene: 218550900

Following gene: 218550897

Centisome position: 80.83

GC content: 37.07

Gene sequence:

>1419_bases
ATGATACGTAAATCAATTGCTGGTTCGGTTATTGCTGTTGTTGTCATTCTGGGTGGTGGTACATGGTTTTCTGGTATGAA
AACTCAAACCAGTGTTGAGCAGTTTATTGTTGGTTTTAATAAAGCTAATAAAAGTAGTAATGGCGCTCATGATATGACGC
TAAGTTGTAAAGATTATAAAAGAGGTTTTTTTAGTTCATCTTTTCAAGTAGCTCTGACCTTTAATAATGGTATTACAGAT
AGCGAAATTAAACCGGGTCAGAATATTATACTGGATGTAAATGTTGATCATGGACCATTTCCACTGGGTCAGCTTTCAAA
GGGTAATATAAAGCCAACTATGGCAACGGCAAAGGTATCTCTGGCTAAGAATGAGGTTACACAATCCTACTACACTGCAA
CGAAAGGTAAGTCACCATTCGTTGCTGATATCGTGGTTGCATTGGGTGGGGCACTAACCACTGAAGTGAATATAACTCCG
GCAACCTTTCAGGAAGTCTCTTATAAAGATGGTAAGTTCACGTTTCGTGGTGATGACAGTTCGCCGTCAAATATGGAAGT
AACTGGATATCTGAATAATATCATTGTAAATTTGGACTCCATAACCAAACTTACTGCAAACTCGATGACTCTTAATTCAT
TATCTCGTATAGAGGAAATGAGATATCCAGTAGGAACAAGTGATGTAAAATTTAATCAGGTTACGCTTCAGGGACTTGAT
GATGACATTACTAAAATTAATTCTTTTGCTTCAAAAATAATATTTGAACGCGCTAAGGATAAAAAATATATCAATACTAA
TTTCTCCTACGGCATTGATACCTTAAAAAAAGGCGATCAAAATTTTGGCAGTGGAGATATGTCGTTGCAATTTAATGCTA
TTGATCCACTCGCTTTTAGAGTTTTTATTGAACACTACAATATTTTATTACGCAAGCAATTGGCAAATAATCCAGATGTA
ATGAAAGATGAAAATGCGATGGATGATCTCCGGGTTGGGGTACTTGCAGAGAGTTTACCAATCTTGTTCAAAAGTGAACC
TGTTATCCAGATCCCTGTTAAATGGAGAAATGCTGTAGGGGAATTGAAAGGTGATCTGAATATTGCGATGGCTGATGCTA
AATCTGTTGATAATAGTATAAAGTCGTTAGATCTGAATATTTCTCTGCCACTTAACGTTATCGGGGAATTAGCGAAACAA
ATTCGTTTATCAGAAGGTCACAGTAGAGAAGCAGCACAGATCAAGGCTGAACAGGCGGTCGCAGAATTTAAGGATGTGGG
TCAACAACTCGATTTACTTAAGTTTGATGAAAATACGGGGTCATTGCAAATTCACTATGGACAAGGAAAAGTATATTTTA
ACGGTAAAGAAATGACGGATATGGAGTTTTTCATGCGCATGGCACGTTTGATGCCTTAA

Upstream 100 bases:

>100_bases
ATATATTCTGATATTTTACGTCGTTGCTGGACAATATAAACTCTGTAGAGGATATTCGCATAGCGATATACCAAATCGCG
TTACTCTTCAGGGATAAAAT

Downstream 100 bases:

>100_bases
TATTTATTACTCGCCTCGGGGATTTTCGGGGCGAGCAACTATGGTCAATCTCGCTGTTCGGAAGAGATAAGCGTATTCAG
ATACTGATCTTTCTCATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 472; Mature: 472

Protein sequence:

>472_residues
MIRKSIAGSVIAVVVILGGGTWFSGMKTQTSVEQFIVGFNKANKSSNGAHDMTLSCKDYKRGFFSSSFQVALTFNNGITD
SEIKPGQNIILDVNVDHGPFPLGQLSKGNIKPTMATAKVSLAKNEVTQSYYTATKGKSPFVADIVVALGGALTTEVNITP
ATFQEVSYKDGKFTFRGDDSSPSNMEVTGYLNNIIVNLDSITKLTANSMTLNSLSRIEEMRYPVGTSDVKFNQVTLQGLD
DDITKINSFASKIIFERAKDKKYINTNFSYGIDTLKKGDQNFGSGDMSLQFNAIDPLAFRVFIEHYNILLRKQLANNPDV
MKDENAMDDLRVGVLAESLPILFKSEPVIQIPVKWRNAVGELKGDLNIAMADAKSVDNSIKSLDLNISLPLNVIGELAKQ
IRLSEGHSREAAQIKAEQAVAEFKDVGQQLDLLKFDENTGSLQIHYGQGKVYFNGKEMTDMEFFMRMARLMP

Sequences:

>Translated_472_residues
MIRKSIAGSVIAVVVILGGGTWFSGMKTQTSVEQFIVGFNKANKSSNGAHDMTLSCKDYKRGFFSSSFQVALTFNNGITD
SEIKPGQNIILDVNVDHGPFPLGQLSKGNIKPTMATAKVSLAKNEVTQSYYTATKGKSPFVADIVVALGGALTTEVNITP
ATFQEVSYKDGKFTFRGDDSSPSNMEVTGYLNNIIVNLDSITKLTANSMTLNSLSRIEEMRYPVGTSDVKFNQVTLQGLD
DDITKINSFASKIIFERAKDKKYINTNFSYGIDTLKKGDQNFGSGDMSLQFNAIDPLAFRVFIEHYNILLRKQLANNPDV
MKDENAMDDLRVGVLAESLPILFKSEPVIQIPVKWRNAVGELKGDLNIAMADAKSVDNSIKSLDLNISLPLNVIGELAKQ
IRLSEGHSREAAQIKAEQAVAEFKDVGQQLDLLKFDENTGSLQIHYGQGKVYFNGKEMTDMEFFMRMARLMP
>Mature_472_residues
MIRKSIAGSVIAVVVILGGGTWFSGMKTQTSVEQFIVGFNKANKSSNGAHDMTLSCKDYKRGFFSSSFQVALTFNNGITD
SEIKPGQNIILDVNVDHGPFPLGQLSKGNIKPTMATAKVSLAKNEVTQSYYTATKGKSPFVADIVVALGGALTTEVNITP
ATFQEVSYKDGKFTFRGDDSSPSNMEVTGYLNNIIVNLDSITKLTANSMTLNSLSRIEEMRYPVGTSDVKFNQVTLQGLD
DDITKINSFASKIIFERAKDKKYINTNFSYGIDTLKKGDQNFGSGDMSLQFNAIDPLAFRVFIEHYNILLRKQLANNPDV
MKDENAMDDLRVGVLAESLPILFKSEPVIQIPVKWRNAVGELKGDLNIAMADAKSVDNSIKSLDLNISLPLNVIGELAKQ
IRLSEGHSREAAQIKAEQAVAEFKDVGQQLDLLKFDENTGSLQIHYGQGKVYFNGKEMTDMEFFMRMARLMP

Specific function: Unknown

COG id: COG5339

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydgA and H.influenzae HI_1236 [H]

Homologues:

Organism=Escherichia coli, GI87082339, Length=475, Percent_Identity=45.4736842105263, Blast_Score=454, Evalue=1e-129,
Organism=Escherichia coli, GI1787900, Length=485, Percent_Identity=27.2164948453608, Blast_Score=211, Evalue=8e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010352 [H]

Pfam domain/function: PF06097 DUF945 [H]

EC number: NA

Molecular weight: Translated: 51978; Mature: 51978

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKSIAGSVIAVVVILGGGTWFSGMKTQTSVEQFIVGFNKANKSSNGAHDMTLSCKDYK
CCCHHHHCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHH
RGFFSSSFQVALTFNNGITDSEIKPGQNIILDVNVDHGPFPLGQLSKGNIKPTMATAKVS
CCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEHEEEE
LAKNEVTQSYYTATKGKSPFVADIVVALGGALTTEVNITPATFQEVSYKDGKFTFRGDDS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCEEEEECCCC
SPSNMEVTGYLNNIIVNLDSITKLTANSMTLNSLSRIEEMRYPVGTSDVKFNQVTLQGLD
CCCCEEEEEEECEEEEEECHHHEECCCCEEHHHHHHHHHHCCCCCCCCEEEEEEEEECCC
DDITKINSFASKIIFERAKDKKYINTNFSYGIDTLKKGDQNFGSGDMSLQFNAIDPLAFR
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCCCCCCEEEEECCCHHHHH
VFIEHYNILLRKQLANNPDVMKDENAMDDLRVGVLAESLPILFKSEPVIQIPVKWRNAVG
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEEEECHHHHHHHH
ELKGDLNIAMADAKSVDNSIKSLDLNISLPLNVIGELAKQIRLSEGHSREAAQIKAEQAV
HCCCCCEEEEECHHHHCCHHHEEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AEFKDVGQQLDLLKFDENTGSLQIHYGQGKVYFNGKEMTDMEFFMRMARLMP
HHHHHHHHHCCEEEECCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIRKSIAGSVIAVVVILGGGTWFSGMKTQTSVEQFIVGFNKANKSSNGAHDMTLSCKDYK
CCCHHHHCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHH
RGFFSSSFQVALTFNNGITDSEIKPGQNIILDVNVDHGPFPLGQLSKGNIKPTMATAKVS
CCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEHEEEE
LAKNEVTQSYYTATKGKSPFVADIVVALGGALTTEVNITPATFQEVSYKDGKFTFRGDDS
HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHCCCCCCEEEEECCCC
SPSNMEVTGYLNNIIVNLDSITKLTANSMTLNSLSRIEEMRYPVGTSDVKFNQVTLQGLD
CCCCEEEEEEECEEEEEECHHHEECCCCEEHHHHHHHHHHCCCCCCCCEEEEEEEEECCC
DDITKINSFASKIIFERAKDKKYINTNFSYGIDTLKKGDQNFGSGDMSLQFNAIDPLAFR
HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHCCCCCCCCCCCEEEEECCCHHHHH
VFIEHYNILLRKQLANNPDVMKDENAMDDLRVGVLAESLPILFKSEPVIQIPVKWRNAVG
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCEEEECHHHHHHHH
ELKGDLNIAMADAKSVDNSIKSLDLNISLPLNVIGELAKQIRLSEGHSREAAQIKAEQAV
HCCCCCEEEEECHHHHCCHHHEEEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
AEFKDVGQQLDLLKFDENTGSLQIHYGQGKVYFNGKEMTDMEFFMRMARLMP
HHHHHHHHHCCEEEECCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7881552; 8346018; 9278503 [H]