| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is yibT [H]
Identifier: 218550877
GI number: 218550877
Start: 3679017
End: 3679301
Strand: Reverse
Name: yibT [H]
Synonym: EFER_3593
Alternate gene names: 218550877
Gene position: 3679301-3679017 (Counterclockwise)
Preceding gene: 218550885
Following gene: 218550872
Centisome position: 80.18
GC content: 47.72
Gene sequence:
>285_bases ATGTCACACTTTTTACCATCTACACTACAATCAGCGGCCGCGCATCCCGACGCGGAGAAACACGGAGGCCCGATCATGAC AAAATTAGGTGAAAACGTTCCGCTTCTTATTGATAAAGCTGTCGATTTTATGGCATCAAGCCAGGCATTCCGGGAATATC TGAACAAGACGCCCCCGCGTAATGTCATTCCTGACAGCGTACCGAAGGAAAACGCGCAGGTGTATCTACAACGCCTGGAT TATTATCGACAGCTCTATCGACCAAAACAGGAAGAGAAACTGTAA
Upstream 100 bases:
>100_bases TAATCAGCCTGGTAATTTTATGATAGATAAGGATTTAAACATAAAAAGCTGATGATAAAAGGCGTAGCCTCAGACGGGGA GATAAAGCACGTTTTCCTTA
Downstream 100 bases:
>100_bases GCGGGAGTTTGTTTACTTCTGAAAGGCTTTTTTCAAGCTGATTGTTGAAATCAGCTCGGTCAGGGAAAGCACCATCGTTG AACGTACCGCCTGTTGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MSHFLPSTLQSAAAHPDAEKHGGPIMTKLGENVPLLIDKAVDFMASSQAFREYLNKTPPRNVIPDSVPKENAQVYLQRLD YYRQLYRPKQEEKL
Sequences:
>Translated_94_residues MSHFLPSTLQSAAAHPDAEKHGGPIMTKLGENVPLLIDKAVDFMASSQAFREYLNKTPPRNVIPDSVPKENAQVYLQRLD YYRQLYRPKQEEKL >Mature_93_residues SHFLPSTLQSAAAHPDAEKHGGPIMTKLGENVPLLIDKAVDFMASSQAFREYLNKTPPRNVIPDSVPKENAQVYLQRLDY YRQLYRPKQEEKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082296, Length=67, Percent_Identity=77.6119402985075, Blast_Score=110, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011326 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10740; Mature: 10609
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFLPSTLQSAAAHPDAEKHGGPIMTKLGENVPLLIDKAVDFMASSQAFREYLNKTPPR CCCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC NVIPDSVPKENAQVYLQRLDYYRQLYRPKQEEKL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SHFLPSTLQSAAAHPDAEKHGGPIMTKLGENVPLLIDKAVDFMASSQAFREYLNKTPPR CCCCHHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC NVIPDSVPKENAQVYLQRLDYYRQLYRPKQEEKL CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA