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The map label for this gene is yibA [H]

Identifier: 218550758

GI number: 218550758

Start: 3533247

End: 3534113

Strand: Direct

Name: yibA [H]

Synonym: EFER_3469

Alternate gene names: 218550758

Gene position: 3533247-3534113 (Clockwise)

Preceding gene: 218550757

Following gene: 218550759

Centisome position: 77.0

GC content: 35.76

Gene sequence:

>867_bases
ATGGAAATAATCGATAAAAATAAAAAAAGAAGAGAGAACAGAGAAACTTTTTTGTATGCAAAATATAAAGCCTATACCCT
TAATCAACTGATTCCTCTTTTATTTAAAAAAAATAGTCTTACACGGCAGGCTGCCATTTTTCGATTACAAATAATTGGAA
CAGATGAGGTTTTTACCTTTGCTGTTAATCTTTGTCAGTCAGAAGGTAAACAGGAAAGAAAGACAGGAATATCCATTCTA
AGTCAACTTTCGATGTCTCCCGAGCACCTGACTCAATCTTTTAATTTAGTCGAAGCGTTATTAGAAAAGGAAACGTCCGC
TAACGTAAGAGCTGCTGCGGTTAATGCAATAGGCCATTTTTGCAGAAGAAACCCATCATTCAACAGCCGGGCACCAGAAC
TACTGACTCGAACAACATATGATAAATCGGTCAATACACGTTGCGCGACTGCGGCAGCGCTATCTGAAATAAATAACATA
AAAGCCATTCCGCTGCTCTTATCGTTACTTAACGACAGCAACGGAGATGTGAGAAATTGGGCTGCATTCTCTGTTAATAC
AAACGAATATGATTCGAAAGAGATACGAGAGGCATTCGTCAAAATGCTTTCAGATGATCATGAACATGCCAGGCTAGAGG
CTATTTTTGGATTAGCTGAAAGAAAAGATAGTCGTGTGGTAAAAACAATAATTAATGAGTTAGAGAAAGATATAATTTTT
GACGAACTTATTGTTGTCGCGGGAGATTTAGGGAGTAAAAGATTCCTTCCTGTTCTTAAAAAATTATTGTCTGAATTTAA
TGATGAAAAAACCATTGGGAAAATAAAAATAGCAATACAAAAAATTACAAGTCCCTATGAATTTTAA

Upstream 100 bases:

>100_bases
AATTAGAGATCCTTTATTAAGTGATTAATAAAGGATCTCATTACAATTAACATGAAAGAGCACCGCAATAGAAAAAAGTT
TACAGGGAAGACGCACGTTT

Downstream 100 bases:

>100_bases
AACTTCATAAATATTTATGGATTTTTTTCATATATCTCTTAGAACACACCCAATAACGCAGTCATTGGGCAATGTTCTGT
GCAGGTCGAAAGAATATAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MEIIDKNKKRRENRETFLYAKYKAYTLNQLIPLLFKKNSLTRQAAIFRLQIIGTDEVFTFAVNLCQSEGKQERKTGISIL
SQLSMSPEHLTQSFNLVEALLEKETSANVRAAAVNAIGHFCRRNPSFNSRAPELLTRTTYDKSVNTRCATAAALSEINNI
KAIPLLLSLLNDSNGDVRNWAAFSVNTNEYDSKEIREAFVKMLSDDHEHARLEAIFGLAERKDSRVVKTIINELEKDIIF
DELIVVAGDLGSKRFLPVLKKLLSEFNDEKTIGKIKIAIQKITSPYEF

Sequences:

>Translated_288_residues
MEIIDKNKKRRENRETFLYAKYKAYTLNQLIPLLFKKNSLTRQAAIFRLQIIGTDEVFTFAVNLCQSEGKQERKTGISIL
SQLSMSPEHLTQSFNLVEALLEKETSANVRAAAVNAIGHFCRRNPSFNSRAPELLTRTTYDKSVNTRCATAAALSEINNI
KAIPLLLSLLNDSNGDVRNWAAFSVNTNEYDSKEIREAFVKMLSDDHEHARLEAIFGLAERKDSRVVKTIINELEKDIIF
DELIVVAGDLGSKRFLPVLKKLLSEFNDEKTIGKIKIAIQKITSPYEF
>Mature_288_residues
MEIIDKNKKRRENRETFLYAKYKAYTLNQLIPLLFKKNSLTRQAAIFRLQIIGTDEVFTFAVNLCQSEGKQERKTGISIL
SQLSMSPEHLTQSFNLVEALLEKETSANVRAAAVNAIGHFCRRNPSFNSRAPELLTRTTYDKSVNTRCATAAALSEINNI
KAIPLLLSLLNDSNGDVRNWAAFSVNTNEYDSKEIREAFVKMLSDDHEHARLEAIFGLAERKDSRVVKTIINELEKDIIF
DELIVVAGDLGSKRFLPVLKKLLSEFNDEKTIGKIKIAIQKITSPYEF

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790021, Length=265, Percent_Identity=40, Blast_Score=206, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR000357 [H]

Pfam domain/function: PF02985 HEAT [H]

EC number: NA

Molecular weight: Translated: 32675; Mature: 32675

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIDKNKKRRENRETFLYAKYKAYTLNQLIPLLFKKNSLTRQAAIFRLQIIGTDEVFTF
CCCCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCHHHHH
AVNLCQSEGKQERKTGISILSQLSMSPEHLTQSFNLVEALLEKETSANVRAAAVNAIGHF
HHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
CRRNPSFNSRAPELLTRTTYDKSVNTRCATAAALSEINNIKAIPLLLSLLNDSNGDVRNW
HHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCE
AAFSVNTNEYDSKEIREAFVKMLSDDHEHARLEAIFGLAERKDSRVVKTIINELEKDIIF
EEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DELIVVAGDLGSKRFLPVLKKLLSEFNDEKTIGKIKIAIQKITSPYEF
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEIIDKNKKRRENRETFLYAKYKAYTLNQLIPLLFKKNSLTRQAAIFRLQIIGTDEVFTF
CCCCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEECCCHHHHH
AVNLCQSEGKQERKTGISILSQLSMSPEHLTQSFNLVEALLEKETSANVRAAAVNAIGHF
HHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
CRRNPSFNSRAPELLTRTTYDKSVNTRCATAAALSEINNIKAIPLLLSLLNDSNGDVRNW
HHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCE
AAFSVNTNEYDSKEIREAFVKMLSDDHEHARLEAIFGLAERKDSRVVKTIINELEKDIIF
EEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DELIVVAGDLGSKRFLPVLKKLLSEFNDEKTIGKIKIAIQKITSPYEF
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551 [H]