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The map label for this gene is yhcO [H]

Identifier: 218550523

GI number: 218550523

Start: 3301278

End: 3301661

Strand: Reverse

Name: yhcO [H]

Synonym: EFER_3217

Alternate gene names: 218550523

Gene position: 3301661-3301278 (Counterclockwise)

Preceding gene: 218550524

Following gene: 218550520

Centisome position: 71.95

GC content: 42.97

Gene sequence:

>384_bases
ATGAAAACCGATGCCAACAGCGTCGGTTTTTTTACGCCTATACTTAGTCGTTGTGCGGATAATCTGATCACTATGTCATG
TGGAAAGCCGACGGAAAAAATGGTGCAGTTGATGAATATCTATACTTTTGATTTTGATGAGATTGAGAACCTGGAAGATT
TTTTCCGTGAGTTTACCCAAACGTTTGGACTTACCCGGGATCAGGTACGCGATCTTGACTCACTTTGGGATGTCATCATG
GAGGATAAGCTACCGCTGCCACTGGAAATTGAGTTTATTCATGTCCATGACAAAACGCGCAGGCGTTTTGGCGCTCTGAT
TCTTTTATTTGATGAAGCGGAAGAAGAACTGGAAGGGCACTTGCGCTTTAATATGCGTCATTAA

Upstream 100 bases:

>100_bases
AATTGCGGATATGGCACGCACCGCCACAAGTCACCGAGCCGGTGAAGCGACTTTCAGGCATGTTGCATAAGTATCAACAT
GCGCTGACAAGCAGTTAAGT

Downstream 100 bases:

>100_bases
GATAAAAAAAGCCCCCGGCAGTTGGGGGGCAATATCGTCGGACTTGACGATGAGGGTTTATTTGTACAGTTCGGCCGTGG
CGTGCCAAGTATCGCCGCTA

Product: barnase inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKTDANSVGFFTPILSRCADNLITMSCGKPTEKMVQLMNIYTFDFDEIENLEDFFREFTQTFGLTRDQVRDLDSLWDVIM
EDKLPLPLEIEFIHVHDKTRRRFGALILLFDEAEEELEGHLRFNMRH

Sequences:

>Translated_127_residues
MKTDANSVGFFTPILSRCADNLITMSCGKPTEKMVQLMNIYTFDFDEIENLEDFFREFTQTFGLTRDQVRDLDSLWDVIM
EDKLPLPLEIEFIHVHDKTRRRFGALILLFDEAEEELEGHLRFNMRH
>Mature_127_residues
MKTDANSVGFFTPILSRCADNLITMSCGKPTEKMVQLMNIYTFDFDEIENLEDFFREFTQTFGLTRDQVRDLDSLWDVIM
EDKLPLPLEIEFIHVHDKTRRRFGALILLFDEAEEELEGHLRFNMRH

Specific function: Unknown

COG id: COG2732

COG function: function code K; Barstar, RNAse (barnase) inhibitor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the barstar family [H]

Homologues:

Organism=Escherichia coli, GI1789635, Length=90, Percent_Identity=82.2222222222222, Blast_Score=157, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000468 [H]

Pfam domain/function: PF01337 Barstar [H]

EC number: NA

Molecular weight: Translated: 15051; Mature: 15051

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTDANSVGFFTPILSRCADNLITMSCGKPTEKMVQLMNIYTFDFDEIENLEDFFREFTQ
CCCCCCCCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TFGLTRDQVRDLDSLWDVIMEDKLPLPLEIEFIHVHDKTRRRFGALILLFDEAEEELEGH
HHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHEEEEECCCHHHHHHH
LRFNMRH
HEEECCC
>Mature Secondary Structure
MKTDANSVGFFTPILSRCADNLITMSCGKPTEKMVQLMNIYTFDFDEIENLEDFFREFTQ
CCCCCCCCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
TFGLTRDQVRDLDSLWDVIMEDKLPLPLEIEFIHVHDKTRRRFGALILLFDEAEEELEGH
HHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHEEEEECCCHHHHHHH
LRFNMRH
HEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]