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The map label for this gene is ttdB [H]

Identifier: 218550514

GI number: 218550514

Start: 3294331

End: 3294948

Strand: Reverse

Name: ttdB [H]

Synonym: EFER_3208

Alternate gene names: 218550514

Gene position: 3294948-3294331 (Counterclockwise)

Preceding gene: 218550515

Following gene: 218550513

Centisome position: 71.81

GC content: 41.75

Gene sequence:

>618_bases
ATGACTAAAAAAATCCTGACTACGCCAATTAAAGATGAAGACCTCGCAGATATTAAAGCGGGAGATATTATTTATCTCAA
TGGTCATATTGTAACGTGTCGTGATGTTGCGCATCGCCGATTAATTGAAGGTGGTAGAGAACTGCCGGTTAATATCGAAG
GTGGCGCAATTCTTCATGCCGGACCGATTGTTCGTCCGATTGCAGGATCTGATGACAAATTTGAAATGGTCTCTGTTGGG
CCTACCACCAGTATGCGTATGGAAAAATTTGAGAAAGAATTTATTGCGCAAACCGGGGTAAAACTGATTGTCGGTAAAGG
TGGTATGGGAAAAGGCACTGAAGAGGGTTGTGCTGAACATAAAGCTTTGCATTGTGTTTTCCCTGCTGGTTGTGCGGTTG
TTGCTGCGGTCTGTGTTGAAGAAATTGAAGATGCACAGTGGCGCGATTTAGGGATGCCGGAAACATTGTGGGTTTGCCGG
GTTAAAGAGTTTGGCCCTTTAATTGTTTCAATTGATACTCATGGCAATAACCTGTTCGAGCAAAATAAAGTTATCTTTAA
TCAGCGTAAAGATATTGTTGCTGAAGAAATATGCCAGAACGTCAGCTTTATTAAATAA

Upstream 100 bases:

>100_bases
TAGCAGTAAACGTTGGGTGCTGGTCGCACCGCAAAGGCCATATCGTTTTCGATAAAGATTTAAATTATACCATTACGTCT
CATACAGGAGTGACTCTCTA

Downstream 100 bases:

>100_bases
CGTCTGATTTAACCTTGCGCACAATAAAGGTGTCTGTTGGTGATTTTTAAAAAGTATCGCCAGTCTGTAGGCCTGGGGAA
GTCCATACTTATTTTTTAAG

Product: L(+)-tartrate dehydratase subunit beta

Products: NA

Alternate protein names: L-TTD beta [H]

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MTKKILTTPIKDEDLADIKAGDIIYLNGHIVTCRDVAHRRLIEGGRELPVNIEGGAILHAGPIVRPIAGSDDKFEMVSVG
PTTSMRMEKFEKEFIAQTGVKLIVGKGGMGKGTEEGCAEHKALHCVFPAGCAVVAAVCVEEIEDAQWRDLGMPETLWVCR
VKEFGPLIVSIDTHGNNLFEQNKVIFNQRKDIVAEEICQNVSFIK

Sequences:

>Translated_205_residues
MTKKILTTPIKDEDLADIKAGDIIYLNGHIVTCRDVAHRRLIEGGRELPVNIEGGAILHAGPIVRPIAGSDDKFEMVSVG
PTTSMRMEKFEKEFIAQTGVKLIVGKGGMGKGTEEGCAEHKALHCVFPAGCAVVAAVCVEEIEDAQWRDLGMPETLWVCR
VKEFGPLIVSIDTHGNNLFEQNKVIFNQRKDIVAEEICQNVSFIK
>Mature_204_residues
TKKILTTPIKDEDLADIKAGDIIYLNGHIVTCRDVAHRRLIEGGRELPVNIEGGAILHAGPIVRPIAGSDDKFEMVSVGP
TTSMRMEKFEKEFIAQTGVKLIVGKGGMGKGTEEGCAEHKALHCVFPAGCAVVAAVCVEEIEDAQWRDLGMPETLWVCRV
KEFGPLIVSIDTHGNNLFEQNKVIFNQRKDIVAEEICQNVSFIK

Specific function: Unknown

COG id: COG1838

COG function: function code C; Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789443, Length=203, Percent_Identity=69.9507389162562, Blast_Score=294, Evalue=3e-81,
Organism=Escherichia coli, GI1787897, Length=182, Percent_Identity=29.6703296703297, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790564, Length=182, Percent_Identity=29.1208791208791, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004647 [H]

Pfam domain/function: PF05683 Fumerase_C [H]

EC number: =4.2.1.32 [H]

Molecular weight: Translated: 22485; Mature: 22354

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKILTTPIKDEDLADIKAGDIIYLNGHIVTCRDVAHRRLIEGGRELPVNIEGGAILHA
CCCCEECCCCCCCCCCCCCCCCEEEECCEEEEHHHHHHHHHHCCCCCCCEEECCCEEEEC
GPIVRPIAGSDDKFEMVSVGPTTSMRMEKFEKEFIAQTGVKLIVGKGGMGKGTEEGCAEH
CCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH
KALHCVFPAGCAVVAAVCVEEIEDAQWRDLGMPETLWVCRVKEFGPLIVSIDTHGNNLFE
CEEEEECCHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCHH
QNKVIFNQRKDIVAEEICQNVSFIK
CCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TKKILTTPIKDEDLADIKAGDIIYLNGHIVTCRDVAHRRLIEGGRELPVNIEGGAILHA
CCCEECCCCCCCCCCCCCCCCEEEECCEEEEHHHHHHHHHHCCCCCCCEEECCCEEEEC
GPIVRPIAGSDDKFEMVSVGPTTSMRMEKFEKEFIAQTGVKLIVGKGGMGKGTEEGCAEH
CCEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHH
KALHCVFPAGCAVVAAVCVEEIEDAQWRDLGMPETLWVCRVKEFGPLIVSIDTHGNNLFE
CEEEEECCHHHHHHHHHHHHHHCCCCHHCCCCCCCEEEEEECCCCCEEEEEECCCCCCHH
QNKVIFNQRKDIVAEEICQNVSFIK
CCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]