Click here to switch to the map view.

The map label for this gene is elbB [H]

Identifier: 218550492

GI number: 218550492

Start: 3269212

End: 3269865

Strand: Reverse

Name: elbB [H]

Synonym: EFER_3186

Alternate gene names: 218550492

Gene position: 3269865-3269212 (Counterclockwise)

Preceding gene: 218550493

Following gene: 218550491

Centisome position: 71.26

GC content: 49.85

Gene sequence:

>654_bases
ATGAAAAAAATTGGCGTAATTCTCAGCGGCTGCGGCGTTTATGATGGCGCAGAGATTCATGAAGCTGTTTTGTCTCTTTT
AGCAATTGCCCGTAGCGGTGCTCAGGCAGTTTGCTTTGCGCCAGATAAAACTCAGGCCGATGTGATTAATCATTTGACGG
GTGAACCAATGGCAGAAACGCGCAATGTGCTGATTGAAGCTGCACGTATTGCACGTGGTGATATTCGCCCACTTTCGCAA
GCTTCTGCTGAGGAGCTTGATGCGCTAATCGTTCCCGGCGGCTTTGGGGCAGCAAAAAATCTGAGCAATTTTGCCACATT
AGGCAGCCAGTGTAGCGTTGACCGTGATCTGGTTGCACTGTGCCAGGCGATGCATAAGGCGGGTAAACCGTTGGGCTTTA
TGTGTATTGCGCCGGCAATGTTGGCGAAAATTTTTGCTTTCCCGGTACGCCTCACTATTGGTACAGATATCGACACCGCT
GAAGTGCTCGAAACAATGGGTGCTGAACATGTGCCATGCCCGGTTGACGATATTGTGGTTGATGAAGATAACAAGATCAT
TACCACTCCGGCTTACATGTTGGCGAAGGATATCGCCCAGGCTGCACTGGGCATTGATAAACTGGTATCGCGCGTGCTGG
TTCTGGCTGAATGA

Upstream 100 bases:

>100_bases
ATCTTAAATCATTTGTTACATGAATCAGTTAAATGTGTGATGCGTAGCATTTTAATTAGATTAATTAATATGTTTTAGCC
AGTGACAAAAGGAAAGTGCA

Downstream 100 bases:

>100_bases
GTGTAAGGCGTTTCTTGCCCTCTTTTTTGCGCCGTTTTCTGTGGCGTGCGCTGATGATACTGGCGTTGTTTTGGGGCGGT
GGTATTGCATTGTTCAGTAT

Product: isoprenoid biosynthesis protein

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKKIGVILSGCGVYDGAEIHEAVLSLLAIARSGAQAVCFAPDKTQADVINHLTGEPMAETRNVLIEAARIARGDIRPLSQ
ASAEELDALIVPGGFGAAKNLSNFATLGSQCSVDRDLVALCQAMHKAGKPLGFMCIAPAMLAKIFAFPVRLTIGTDIDTA
EVLETMGAEHVPCPVDDIVVDEDNKIITTPAYMLAKDIAQAALGIDKLVSRVLVLAE

Sequences:

>Translated_217_residues
MKKIGVILSGCGVYDGAEIHEAVLSLLAIARSGAQAVCFAPDKTQADVINHLTGEPMAETRNVLIEAARIARGDIRPLSQ
ASAEELDALIVPGGFGAAKNLSNFATLGSQCSVDRDLVALCQAMHKAGKPLGFMCIAPAMLAKIFAFPVRLTIGTDIDTA
EVLETMGAEHVPCPVDDIVVDEDNKIITTPAYMLAKDIAQAALGIDKLVSRVLVLAE
>Mature_217_residues
MKKIGVILSGCGVYDGAEIHEAVLSLLAIARSGAQAVCFAPDKTQADVINHLTGEPMAETRNVLIEAARIARGDIRPLSQ
ASAEELDALIVPGGFGAAKNLSNFATLGSQCSVDRDLVALCQAMHKAGKPLGFMCIAPAMLAKIFAFPVRLTIGTDIDTA
EVLETMGAEHVPCPVDDIVVDEDNKIITTPAYMLAKDIAQAALGIDKLVSRVLVLAE

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=223, Percent_Identity=44.8430493273543, Blast_Score=185, Evalue=2e-47,
Organism=Homo sapiens, GI296531408, Length=223, Percent_Identity=40.3587443946188, Blast_Score=142, Evalue=2e-34,
Organism=Escherichia coli, GI87082228, Length=217, Percent_Identity=87.0967741935484, Blast_Score=389, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22795; Mature: 22795

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGVILSGCGVYDGAEIHEAVLSLLAIARSGAQAVCFAPDKTQADVINHLTGEPMAET
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCHHHH
RNVLIEAARIARGDIRPLSQASAEELDALIVPGGFGAAKNLSNFATLGSQCSVDRDLVAL
HHHHHHHHHHHCCCCCCHHHCCHHHCCEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHH
CQAMHKAGKPLGFMCIAPAMLAKIFAFPVRLTIGTDIDTAEVLETMGAEHVPCPVDDIVV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCCCCCCCEEE
DEDNKIITTPAYMLAKDIAQAALGIDKLVSRVLVLAE
CCCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIGVILSGCGVYDGAEIHEAVLSLLAIARSGAQAVCFAPDKTQADVINHLTGEPMAET
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCCCHHHH
RNVLIEAARIARGDIRPLSQASAEELDALIVPGGFGAAKNLSNFATLGSQCSVDRDLVAL
HHHHHHHHHHHCCCCCCHHHCCHHHCCEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHH
CQAMHKAGKPLGFMCIAPAMLAKIFAFPVRLTIGTDIDTAEVLETMGAEHVPCPVDDIVV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCCCCCCCCCEEE
DEDNKIITTPAYMLAKDIAQAALGIDKLVSRVLVLAE
CCCCCEEECHHHHHHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]