| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is 218550404
Identifier: 218550404
GI number: 218550404
Start: 3182160
End: 3183845
Strand: Reverse
Name: 218550404
Synonym: EFER_3096
Alternate gene names: NA
Gene position: 3183845-3182160 (Counterclockwise)
Preceding gene: 218550405
Following gene: 218550403
Centisome position: 69.38
GC content: 46.38
Gene sequence:
>1686_bases ATGGCTTATAAAGTTTTAGGTAAATTAGTCGGTAACACTGGTGATGCCAGTCAGTTAACTATGGTTGTGCAAGACTCGTT TTCAGTACGCCGTGGTGAGTTTGTACGCATTATGCACCAGGAACGCAAAGATGAGGGGCAAGTCGCCGTACTGGGGCGAG TGACCAAGATAAGCCGTACTAATATGCTCTATAACGCCGGCTTTGGCGATGGTGTAACCGAGCTTGAACTTTTGCCCGGT GCGAATGTAACTGGTGAGAATATGTTTGCTCAGGTCGAGCTGGTTGGTTACCGCGATCCTGTTACTCGTCAAATCAAAAT TCCACGTCGCCCGCTTAACCCGGGTACCGCTGTTGAAACCGTCGATTTTCAGTTTTTGAGTGATTTTTACGAATTTAATG AACACTCCAGTTTGCACTTGGGTAACTTAGTAGGCTACGACAAAGGTGAGAATACAGTTCCTGTTTTTATTGACGTGAAC AAGTTGGTCACTGAGCATTTGGCTGTTCTGGCAATGACGGGTTCAGGTAAGTCTTATACAGTTGGCCGCATTATTGAGCG TTTAGTTGCGGTTAATAACGGTACGGTAGTAGTATTTGACCCACATGGTGAATACGGTAAAGCCCTCGCTGGCGGTAATC TGCAATTCTCAAGCCTCTTAGAAGCCACTGACGATAAGCGTGATCAAGAAGCACTGCCACTGATAAAACAGACCTTTGAA AAGCTGCAGACCGCCGGTGCAGGTATTCAGGTTTACTCGCCGCAGCACGAATCTTTTAAACATAAATACGCCAGTAAGAA TACGCCATTAGCGCTTCAGTTTGACCATTTTGAAATGGACGATATTGCTGAAATATTACCTGGCTTAACGGAACCGCAGC AACGAGTACTCGATGTTGCAATTCGTTATTGGCGCTCTGCAGATAAGACTGAGCCACGAGATATTAACCGCCTACGCTTC TTATTAGGTGATGGTATTGAAGAGTTAAAAGAGTGGGACGACCTTTCTGAAGCTGAGGCGAAGGCGTTATCAGGCCGTAG TGCCGCCGTCGCCTCGATGAAGCTTTCACGCGTGCTTAATGAAGCTAAAAGTTTTTACAGCGCAACAATGGCTGAGCCAA CTGATATTTACAAAATGGTGGGCCGCCCGAGCAATCAACAGGGGCGTTTAGTTGTTGTTGACTTACAAGGTTTGAGTGAT ACCGCTAAGCAAGTCATTTGTGCACTGTTATCTAGTGAAATATTAAAAGCAGCCTCGAGCAAAACGGACCCGCTGCGCCC ATGCTTTATCATTTACGAAGAGGGCCATAATTTTGCCCCGGCCGGCGGCAACGCAGTCAGTCACCGCATTATTAAAAAGA TCGCCGGTGAAGGTCGTAAATTTGGTGTTGGATTTGGCATTGTGAGCCAGCGTCCATCGAAATTAGATTCAGATGTGACC TCTCAGTGCAATACGCTAATTACGATGCGCTTAAAGAACCCAGACGATCAACGATTTATAGCTAAAGCATCAGATATGGT GAGCAAAGCTGATCTGGAGGAACTCCCGAGTTTATCAACCGGTGAAGCTTTGGTGTGTGGTCGTTCAATCCCTGCACCAC TGCTTGTTAAAGTTGGTAGTAAGGCATTAATTCACGGTGGTGAATCACCAGAGGTACTGCGTGTTTGGGGCTCTTTCAGT GGCTAA
Upstream 100 bases:
>100_bases CCTAAATTTGCTACGTTTTATCGCCAGGGTTTACACCAGGCACTAAAGAATAATGATATTGAGGCAGGGTGGTTGGCAGG CCTCGATGAGGGATTGAATA
Downstream 100 bases:
>100_bases GGTGCCTATGCCTGAGGTTGCCTGGGTAAATGAGACATTTCCACTTTTAGCAAGCGGTAAGCTATTGGACCAGGATGTAT TGGTCCACAGCCTGGGCTGT
Product: nucleoside triphosphate hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 561; Mature: 560
Protein sequence:
>561_residues MAYKVLGKLVGNTGDASQLTMVVQDSFSVRRGEFVRIMHQERKDEGQVAVLGRVTKISRTNMLYNAGFGDGVTELELLPG ANVTGENMFAQVELVGYRDPVTRQIKIPRRPLNPGTAVETVDFQFLSDFYEFNEHSSLHLGNLVGYDKGENTVPVFIDVN KLVTEHLAVLAMTGSGKSYTVGRIIERLVAVNNGTVVVFDPHGEYGKALAGGNLQFSSLLEATDDKRDQEALPLIKQTFE KLQTAGAGIQVYSPQHESFKHKYASKNTPLALQFDHFEMDDIAEILPGLTEPQQRVLDVAIRYWRSADKTEPRDINRLRF LLGDGIEELKEWDDLSEAEAKALSGRSAAVASMKLSRVLNEAKSFYSATMAEPTDIYKMVGRPSNQQGRLVVVDLQGLSD TAKQVICALLSSEILKAASSKTDPLRPCFIIYEEGHNFAPAGGNAVSHRIIKKIAGEGRKFGVGFGIVSQRPSKLDSDVT SQCNTLITMRLKNPDDQRFIAKASDMVSKADLEELPSLSTGEALVCGRSIPAPLLVKVGSKALIHGGESPEVLRVWGSFS G
Sequences:
>Translated_561_residues MAYKVLGKLVGNTGDASQLTMVVQDSFSVRRGEFVRIMHQERKDEGQVAVLGRVTKISRTNMLYNAGFGDGVTELELLPG ANVTGENMFAQVELVGYRDPVTRQIKIPRRPLNPGTAVETVDFQFLSDFYEFNEHSSLHLGNLVGYDKGENTVPVFIDVN KLVTEHLAVLAMTGSGKSYTVGRIIERLVAVNNGTVVVFDPHGEYGKALAGGNLQFSSLLEATDDKRDQEALPLIKQTFE KLQTAGAGIQVYSPQHESFKHKYASKNTPLALQFDHFEMDDIAEILPGLTEPQQRVLDVAIRYWRSADKTEPRDINRLRF LLGDGIEELKEWDDLSEAEAKALSGRSAAVASMKLSRVLNEAKSFYSATMAEPTDIYKMVGRPSNQQGRLVVVDLQGLSD TAKQVICALLSSEILKAASSKTDPLRPCFIIYEEGHNFAPAGGNAVSHRIIKKIAGEGRKFGVGFGIVSQRPSKLDSDVT SQCNTLITMRLKNPDDQRFIAKASDMVSKADLEELPSLSTGEALVCGRSIPAPLLVKVGSKALIHGGESPEVLRVWGSFS G >Mature_560_residues AYKVLGKLVGNTGDASQLTMVVQDSFSVRRGEFVRIMHQERKDEGQVAVLGRVTKISRTNMLYNAGFGDGVTELELLPGA NVTGENMFAQVELVGYRDPVTRQIKIPRRPLNPGTAVETVDFQFLSDFYEFNEHSSLHLGNLVGYDKGENTVPVFIDVNK LVTEHLAVLAMTGSGKSYTVGRIIERLVAVNNGTVVVFDPHGEYGKALAGGNLQFSSLLEATDDKRDQEALPLIKQTFEK LQTAGAGIQVYSPQHESFKHKYASKNTPLALQFDHFEMDDIAEILPGLTEPQQRVLDVAIRYWRSADKTEPRDINRLRFL LGDGIEELKEWDDLSEAEAKALSGRSAAVASMKLSRVLNEAKSFYSATMAEPTDIYKMVGRPSNQQGRLVVVDLQGLSDT AKQVICALLSSEILKAASSKTDPLRPCFIIYEEGHNFAPAGGNAVSHRIIKKIAGEGRKFGVGFGIVSQRPSKLDSDVTS QCNTLITMRLKNPDDQRFIAKASDMVSKADLEELPSLSTGEALVCGRSIPAPLLVKVGSKALIHGGESPEVLRVWGSFSG
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1429 and MJ1565 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538 [H]
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel [H]
EC number: NA
Molecular weight: Translated: 61419; Mature: 61288
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYKVLGKLVGNTGDASQLTMVVQDSFSVRRGEFVRIMHQERKDEGQVAVLGRVTKISRT CHHHHHHHHHCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHC NMLYNAGFGDGVTELELLPGANVTGENMFAQVELVGYRDPVTRQIKIPRRPLNPGTAVET CEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCCCCEEE VDFQFLSDFYEFNEHSSLHLGNLVGYDKGENTVPVFIDVNKLVTEHLAVLAMTGSGKSYT HHHHHHHHHHHHCCCCCEEECCEECCCCCCCEEEEEEEHHHHHHHHEEEEEEECCCCCEE VGRIIERLVAVNNGTVVVFDPHGEYGKALAGGNLQFSSLLEATDDKRDQEALPLIKQTFE HHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH KLQTAGAGIQVYSPQHESFKHKYASKNTPLALQFDHFEMDDIAEILPGLTEPQQRVLDVA HHHHCCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHH IRYWRSADKTEPRDINRLRFLLGDGIEELKEWDDLSEAEAKALSGRSAAVASMKLSRVLN HHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH EAKSFYSATMAEPTDIYKMVGRPSNQQGRLVVVDLQGLSDTAKQVICALLSSEILKAASS HHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC KTDPLRPCFIIYEEGHNFAPAGGNAVSHRIIKKIAGEGRKFGVGFGIVSQRPSKLDSDVT CCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHCCCCCCCCHHHH SQCNTLITMRLKNPDDQRFIAKASDMVSKADLEELPSLSTGEALVCGRSIPAPLLVKVGS HCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHCCC KALIHGGESPEVLRVWGSFSG EEEEECCCCCCEEEECCCCCC >Mature Secondary Structure AYKVLGKLVGNTGDASQLTMVVQDSFSVRRGEFVRIMHQERKDEGQVAVLGRVTKISRT HHHHHHHHHCCCCCHHHEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHHHC NMLYNAGFGDGVTELELLPGANVTGENMFAQVELVGYRDPVTRQIKIPRRPLNPGTAVET CEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCCCCEEE VDFQFLSDFYEFNEHSSLHLGNLVGYDKGENTVPVFIDVNKLVTEHLAVLAMTGSGKSYT HHHHHHHHHHHHCCCCCEEECCEECCCCCCCEEEEEEEHHHHHHHHEEEEEEECCCCCEE VGRIIERLVAVNNGTVVVFDPHGEYGKALAGGNLQFSSLLEATDDKRDQEALPLIKQTFE HHHHHHHHHHCCCCEEEEECCCCCCCCEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH KLQTAGAGIQVYSPQHESFKHKYASKNTPLALQFDHFEMDDIAEILPGLTEPQQRVLDVA HHHHCCCCEEEECCCHHHHHHHHCCCCCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHH IRYWRSADKTEPRDINRLRFLLGDGIEELKEWDDLSEAEAKALSGRSAAVASMKLSRVLN HHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH EAKSFYSATMAEPTDIYKMVGRPSNQQGRLVVVDLQGLSDTAKQVICALLSSEILKAASS HHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC KTDPLRPCFIIYEEGHNFAPAGGNAVSHRIIKKIAGEGRKFGVGFGIVSQRPSKLDSDVT CCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECHHCCCCCCCCHHHH SQCNTLITMRLKNPDDQRFIAKASDMVSKADLEELPSLSTGEALVCGRSIPAPLLVKVGS HCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHCCC KALIHGGESPEVLRVWGSFSG EEEEECCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]