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The map label for this gene is ygiF [H]

Identifier: 218550306

GI number: 218550306

Start: 3068854

End: 3070155

Strand: Reverse

Name: ygiF [H]

Synonym: EFER_2998

Alternate gene names: 218550306

Gene position: 3070155-3068854 (Counterclockwise)

Preceding gene: 218550307

Following gene: 218550305

Centisome position: 66.91

GC content: 55.38

Gene sequence:

>1302_bases
ATGGCTCAGGAAATCGAATTAAAGTTTATTGTTAATCACAGTGCCGTTGAGGCGCTGCGTGACCATCTCAATACGCTGGG
CGGCGAGCACCATGACCCCGTGCAGTTGCTGAATATTTACTACGAAACGCCGGATAACTGGCTGCGTGGACACGATATGG
GCTTACGTATTCGTGGCGAAAACGGCCGCTATGAGATGACCATGAAAGTCGCAGGAAGAGTGACTGGCGGTTTACACCAG
CGCCCGGAATATAATGTGGCGTTGAGCGAGCCGACGCTCGACCTGGCGCAGTTACCGACGGAAGTCTGGCCGAACGGCGA
ATTGCCAGCCGATCTCGCGTCCCGCGTGCAGCCGCTGTTCAGCACCGATTTTTATCGCGAAAAATGGTTGGTGGAGGTCG
ATGGCAGCAGCATTGAAATCGCTCTCGATCAGGGTGAGGTGAAAGCGGGTGAATTTGCTGAACCTATCTGTGAGCTGGAA
CTGGAACTGCTTAGCGGCGACATGCGTGCGGTGCTGAAACTGGCGAACCAACTGGTATCCCAAACCGGATTACGTCAGGG
CAGCCTGAGCAAAGCCGCGCGCGGCTATCATCTGGCGCAGGGCAATCCCGCGCGTGAAATCAAACCCACCACCATTTTGC
ATGTTGCGGCAAAAGCTGATGTGGAACAGGGGCTGGAAGCGGCGCTCGAGCTGGCGTTAGCACAATGGCAATACCATGAA
GAGTTGTGGATACGCGGCAATGAGGCAGCGAAAGAGCAGGTGCTGGCAGCAATCGGCCTGGTTCGCCATACTCTGATGCT
GTTCGGCGGTATCGTGCCACGTAAAGCGAGCACTCACTTACGTGATCTGCTGACTCAATGCGAGGCGACCATCGCTTCTG
CGGTATCTGCCGTGACGGCGGTCTACTCTACCGAAACGGCGATGGCGAAGCTGGCGTTGACCGAATGGCTGGTAAGCAAA
GCCTGGCAGCCGTTTTTAGATGCCAAAGCGCAGAGCAAAATCAGCGATTCCTTCAAGCGCTTTGCCGATATCCATCTTTC
CCGCCATGCCGCTGAACTGAAAAGCGTTTTCTGCCAGCCGTTAGGCGATCGCTACCGTGACCAATTGCCGCGCCTGACGC
GTGACATTGACTCAATACTGTTGCTGGCGGGTTACTACGATCCTCTCGTCGCGCAAGCCTGGCTGGAGAACTGGCAGGGG
CTGCGTCACGCTATTGCGACCGGGCAACGCATTGAAATTGAACATTTCCGTAATGAGGCAAACAATCAGGAACCGTTCTG
GTTGCACAGCGGAAAACGTTAA

Upstream 100 bases:

>100_bases
GCATGGCAATTTGGCGCAAAATACTATCTACTGACAAAAAAGATCGCATTAAGTTCGCCGTTCATCGTCACTTATGTGAC
ATAACCGATAAGTAAAGGCC

Downstream 100 bases:

>100_bases
TCAGGCAAGGATAAAATCGCTTATGAAGCCGCTCTCTTCACCGTTACAGCAGTACTGGCAGACCGTTGTTGAGCGGCTGC
CAGCGCCTTTAGCCGAGGAA

Product: adenylate cyclase

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQ
RPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLFSTDFYREKWLVEVDGSSIEIALDQGEVKAGEFAEPICELE
LELLSGDMRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHE
ELWIRGNEAAKEQVLAAIGLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSK
AWQPFLDAKAQSKISDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPLVAQAWLENWQG
LRHAIATGQRIEIEHFRNEANNQEPFWLHSGKR

Sequences:

>Translated_433_residues
MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQ
RPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLFSTDFYREKWLVEVDGSSIEIALDQGEVKAGEFAEPICELE
LELLSGDMRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHE
ELWIRGNEAAKEQVLAAIGLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSK
AWQPFLDAKAQSKISDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPLVAQAWLENWQG
LRHAIATGQRIEIEHFRNEANNQEPFWLHSGKR
>Mature_432_residues
AQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQR
PEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLFSTDFYREKWLVEVDGSSIEIALDQGEVKAGEFAEPICELEL
ELLSGDMRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHEE
LWIRGNEAAKEQVLAAIGLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTAVYSTETAMAKLALTEWLVSKA
WQPFLDAKAQSKISDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPLVAQAWLENWQGL
RHAIATGQRIEIEHFRNEANNQEPFWLHSGKR

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=433, Percent_Identity=97.9214780600462, Blast_Score=853, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 48498; Mature: 48367

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGE
CCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCHHCCCCCEEEEECC
NGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLF
CCCEEEEEEEHHHHCCCCCCCCCCCEEECCCCCHHHHCCHHHCCCCCCCHHHHHHHHHHH
STDFYREKWLVEVDGSSIEIALDQGEVKAGEFAEPICELELELLSGDMRAVLKLANQLVS
HHHHHHCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
QTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHE
HHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ELWIRGNEAAKEQVLAAIGLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTA
HHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VYSTETAMAKLALTEWLVSKAWQPFLDAKAQSKISDSFKRFADIHLSRHAAELKSVFCQP
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGDRYRDQLPRLTRDIDSILLLAGYYDPLVAQAWLENWQGLRHAIATGQRIEIEHFRNEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHCC
NNQEPFWLHSGKR
CCCCCEEECCCCC
>Mature Secondary Structure 
AQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLRGHDMGLRIRGE
CCEEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHEEEECCCCHHCCCCCEEEEECC
NGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEVWPNGELPADLASRVQPLF
CCCEEEEEEEHHHHCCCCCCCCCCCEEECCCCCHHHHCCHHHCCCCCCCHHHHHHHHHHH
STDFYREKWLVEVDGSSIEIALDQGEVKAGEFAEPICELELELLSGDMRAVLKLANQLVS
HHHHHHCCEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
QTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAKADVEQGLEAALELALAQWQYHE
HHCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
ELWIRGNEAAKEQVLAAIGLVRHTLMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVTA
HHEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VYSTETAMAKLALTEWLVSKAWQPFLDAKAQSKISDSFKRFADIHLSRHAAELKSVFCQP
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGDRYRDQLPRLTRDIDSILLLAGYYDPLVAQAWLENWQGLRHAIATGQRIEIEHFRNEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHCC
NNQEPFWLHSGKR
CCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]