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The map label for this gene is yghB [H]

Identifier: 218550257

GI number: 218550257

Start: 3015144

End: 3015803

Strand: Direct

Name: yghB [H]

Synonym: EFER_2949

Alternate gene names: 218550257

Gene position: 3015144-3015803 (Clockwise)

Preceding gene: 218550256

Following gene: 218550259

Centisome position: 65.71

GC content: 50.0

Gene sequence:

>660_bases
ATGGCTGTTATTCAAGATATTATCGCTGCGCTCTGGCAACACGATTTTGCGGCACTTGCCGATCCTCATATCGTTAACGT
TGTTTACTTTGTCATGTTTGCCACGCTGTTTTTAGAAAACGGCCTGTTACCGGCATCGTTTTTACCAGGCGATAGCCTGT
TGTTACTGGCAGGTGCGCTGATAGCGCAAGGAGTAATGGATTTTATTCCGACGCTGGCGATTTTAACGACGGCTGCGAGT
CTGGGTTGTTGGCTGAGCTATATTCAGGGGCGCTGGCTGGGAAATACCAAAACGGTGAAAGGTTGGCTGGCGCAGCTTCC
AGACAAATACCACCAACGTGCCACTTGCATGTTTGATCGCCACGGTTTGCTGGCCCTCCTCGCCGGACGGTTTCTCGCGT
TTGTTCGTACCTTGTTACCCACCATGGCGGGAATTTCTGGCTTACCCAACAACCGTTTTCAGTTTTTCAACTGGCTGAGT
GGTCTGTTATGGGTCACTGTAGTGACCAGCTTTGGCTATGCCCTGAGCATGATCCCGTTTGTAAAACGCCATGAAGATCA
GGTCATGACCTTCCTGATGATCCTGCCGATTGCCCTGCTGACTGCGGGTTTGTTAGGCACGCTGTTTGTGGTTATCAAAA
AGAAATACTGCAACTCCTGA

Upstream 100 bases:

>100_bases
GAAAAGTCTTAAATTGTTGCGCCCGTGATCAAGGCGTCACGGGCGAATCAGGAGTACAATAGGCAGTTAAAGGCTGAAAT
GCTGTTCCACAGGAAAGTCC

Downstream 100 bases:

>100_bases
GTATGTAGCCTGTACCCGACATTTGTGCGGGTACAGGCTAACTCCCTTGTATCGTCCGCATTCTTGCCGCATCTTCTCCC
GGCGTCACACCAAAATAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MAVIQDIIAALWQHDFAALADPHIVNVVYFVMFATLFLENGLLPASFLPGDSLLLLAGALIAQGVMDFIPTLAILTTAAS
LGCWLSYIQGRWLGNTKTVKGWLAQLPDKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNNRFQFFNWLS
GLLWVTVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCNS

Sequences:

>Translated_219_residues
MAVIQDIIAALWQHDFAALADPHIVNVVYFVMFATLFLENGLLPASFLPGDSLLLLAGALIAQGVMDFIPTLAILTTAAS
LGCWLSYIQGRWLGNTKTVKGWLAQLPDKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNNRFQFFNWLS
GLLWVTVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCNS
>Mature_218_residues
AVIQDIIAALWQHDFAALADPHIVNVVYFVMFATLFLENGLLPASFLPGDSLLLLAGALIAQGVMDFIPTLAILTTAASL
GCWLSYIQGRWLGNTKTVKGWLAQLPDKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNNRFQFFNWLSG
LLWVTVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCNS

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1789384, Length=219, Percent_Identity=95.8904109589041, Blast_Score=407, Evalue=1e-115,
Organism=Escherichia coli, GI1789481, Length=218, Percent_Identity=61.0091743119266, Blast_Score=262, Evalue=2e-71,
Organism=Escherichia coli, GI1788656, Length=181, Percent_Identity=32.5966850828729, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24223; Mature: 24092

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVIQDIIAALWQHDFAALADPHIVNVVYFVMFATLFLENGLLPASFLPGDSLLLLAGAL
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
IAQGVMDFIPTLAILTTAASLGCWLSYIQGRWLGNTKTVKGWLAQLPDKYHQRATCMFDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHC
HGLLALLAGRFLAFVRTLLPTMAGISGLPNNRFQFFNWLSGLLWVTVVTSFGYALSMIPF
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVIQDIIAALWQHDFAALADPHIVNVVYFVMFATLFLENGLLPASFLPGDSLLLLAGAL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
IAQGVMDFIPTLAILTTAASLGCWLSYIQGRWLGNTKTVKGWLAQLPDKYHQRATCMFDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHC
HGLLALLAGRFLAFVRTLLPTMAGISGLPNNRFQFFNWLSGLLWVTVVTSFGYALSMIPF
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKRHEDQVMTFLMILPIALLTAGLLGTLFVVIKKKYCNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]