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The map label for this gene is yiaN [C]

Identifier: 218550185

GI number: 218550185

Start: 2945230

End: 2945493

Strand: Direct

Name: yiaN [C]

Synonym: EFER_2877

Alternate gene names: 218550185

Gene position: 2945230-2945493 (Clockwise)

Preceding gene: 218550184

Following gene: 218550187

Centisome position: 64.18

GC content: 39.02

Gene sequence:

>264_bases
ATGACACCTGTACTTGTACCTTTGATTAAACAGGCTGGAATAGATCCGGTATATTTCGGTGTTCTTTTTGTAATAAATAC
GTCCATTGGTTTGATAACACCACCAGTAGGCACAGTATTAAATGTAATTTGTGGTATTGGAAAGATAAGTATGGATGAGC
TGGTCAAAGGTATTTTGCCGTTCTTACTCACATGCGTGGTAATCCTTATTTTACTGGTACTCTTCCCGCAATTAGTGCTC
TTTCCTTTGGCCCTTATGACCTGA

Upstream 100 bases:

>100_bases
TGTGTTCAATGGCTTCGCATGATTTGAGTGTTTTTTTGTAAGAGTTCGGAGAAACGGTTAATTGATCACCGAATTGAATA
CTTGACCCACAATTTTAGTT

Downstream 100 bases:

>100_bases
GAAAAGGTTGGGTGTTGTATAAAACACCCAACCATCGCTTTAATTACTCATCTTCAAGATAAGTATAACCGTACAAACCT
GCCTCGAACTCTTCCAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MTPVLVPLIKQAGIDPVYFGVLFVINTSIGLITPPVGTVLNVICGIGKISMDELVKGILPFLLTCVVILILLVLFPQLVL
FPLALMT

Sequences:

>Translated_87_residues
MTPVLVPLIKQAGIDPVYFGVLFVINTSIGLITPPVGTVLNVICGIGKISMDELVKGILPFLLTCVVILILLVLFPQLVL
FPLALMT
>Mature_86_residues
TPVLVPLIKQAGIDPVYFGVLFVINTSIGLITPPVGTVLNVICGIGKISMDELVKGILPFLLTCVVILILLVLFPQLVLF
PLALMT

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=83, Percent_Identity=55.421686746988, Blast_Score=98, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 9302; Mature: 9171

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPVLVPLIKQAGIDPVYFGVLFVINTSIGLITPPVGTVLNVICGIGKISMDELVKGILP
CCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
FLLTCVVILILLVLFPQLVLFPLALMT
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPVLVPLIKQAGIDPVYFGVLFVINTSIGLITPPVGTVLNVICGIGKISMDELVKGILP
CCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH
FLLTCVVILILLVLFPQLVLFPLALMT
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]