| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218550180
Identifier: 218550180
GI number: 218550180
Start: 2935664
End: 2937226
Strand: Reverse
Name: 218550180
Synonym: EFER_2870
Alternate gene names: NA
Gene position: 2937226-2935664 (Counterclockwise)
Preceding gene: 218550181
Following gene: 218550177
Centisome position: 64.01
GC content: 46.83
Gene sequence:
>1563_bases ATGGAACGCACTCTTCCCTGGAAGCCCCTTCTTTGTTTGTTATTTCTTTTATCAACTGGCTGCGATAGAGCAGAAAAACA GAAAATTGCCGCACAGCTGCAACAAGACAAAGAAGCTATTTCCTCTGTCGTCAAAAAGAGTTATCGCGCATTATGTGGCC CTGAGTTTGTCACCAGCACAGATTCGCACGATCGCCTTGCGGAAATGCAGCAAGTATTTACGCCTGCTTTAATGGAGCCT GTACTGAAATTCTGGCAAGAGTCACCCAAAACGTGTAAACGACGTTTTCCCAGTTATAGCGATCCTTTAGCGACCTTCAT CGAAGGCGACAAGGCGCAGGTTGGTGCTTTTTTTGGTCACCAATCTGATATTGATATTCCAATGGAGTTAATCCGGCAAG GGGATGGTAAATGGAAGATTGCGGCGATTGATTTTGCATCGTTACATGAGTTTGAAAAAAACGCTCGGGTTACTGATGAG GTGCAAAAGCAAATAGATTTGCTTAAAAAACGCTCATTCAAGCAACATAGGGATTCCCCTGTGTTGACGAGGACCGCGCC TGAGCGGGTCAGTAAGTCCCCTTTGACATCGGTGGAGCAAACAGTTACGGAGCAAGACTCTTCCTGGCTGGATGTCTTAC TGACAATAGGCAAATATGCCCTTTATCTGGTAGCGATAATACTTATTCTCGCCTTGGTGGCTGTTTTGTGGATTGGTTAT GGCCTGGTGTTCGCCGGACATCGCCTTTTCAAAGCATCTTGTAAAGATCCCTCAATTCAAAAAATTCCCGTGGCTGAACG TTGGGCAATGGCAGTCGGCGCGCCTTATGCCATTGCGGGTAACAATCACTGGGCGCGACGAGTCGTTAATGATGATTCCG TGGAAGCAGAGAATGATTGCAAAAGTGAAGTTGAGTCACTTGCTGACATGTGGGGCGTCTTTGATCGGGATTCGTTACTT GAGCAACTCTTAGCTTTGTTTGTAGCAGGGCACCGTTCAGTTTATGAAGAACAGATCAAAAACGATAGCGAAATGCCGGA TGCTGAGTATCGCGCGTTCGCTCAGCAATTAGCTCAGAACGCGAAATTAAGTAGCGAAGCGAAAGAGCGTTTGTGGCAGC TACAGATGGTCAGAAAAAATCGACGTAAAATATGCGACATAGATTTTTGTGCCTGGGATATGGTGCGCTTTGTCATGCTA TGTAATAGCGGGGCGCAAGTGGGATACATTACCCAGCGTGAAATGGTCGATTTTTCGATGCTGGCAGCCAGACGCGTACA GCAACATTACAGAAGCTGGCGCGAATTGGCCGGACATTTTTTGCTGGCCCGTTGGTACTGGAAAGCAACGGATAAACGGC ACCTGATTACCCATATTCTTTTTAAGAAAGCCATTACATCTTTATTAAAAGAGCAGGGGAGTCCGTGGCGTACTTTACCC TGGGATACTCCATTACCTGAAGGAACAGAGACGGCTTTTGCCTGGGCTTGTGGCGTAAGCACTGCCGATGTAGTAGAGGT GCAACCGGATACACCAGATAAAGCAATCTACGAAGCGAATTGA
Upstream 100 bases:
>100_bases GGCTTATCATTTAAAGTCTTTCCTGTTAATTAAGTCATTTTTACCGTGGCTGCTGTTTTTTAATGGATTGTTATTATTGC GTTTTTAAGGGAATAAATAG
Downstream 100 bases:
>100_bases TGCCCCTAATGATTGAGCTTGTTTAATGACTGTGGCCGGCCCTGAATGAAAATTTCTCCGACATTCCTGTCGGAGAAATA TGAAATCACTTAACTCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MERTLPWKPLLCLLFLLSTGCDRAEKQKIAAQLQQDKEAISSVVKKSYRALCGPEFVTSTDSHDRLAEMQQVFTPALMEP VLKFWQESPKTCKRRFPSYSDPLATFIEGDKAQVGAFFGHQSDIDIPMELIRQGDGKWKIAAIDFASLHEFEKNARVTDE VQKQIDLLKKRSFKQHRDSPVLTRTAPERVSKSPLTSVEQTVTEQDSSWLDVLLTIGKYALYLVAIILILALVAVLWIGY GLVFAGHRLFKASCKDPSIQKIPVAERWAMAVGAPYAIAGNNHWARRVVNDDSVEAENDCKSEVESLADMWGVFDRDSLL EQLLALFVAGHRSVYEEQIKNDSEMPDAEYRAFAQQLAQNAKLSSEAKERLWQLQMVRKNRRKICDIDFCAWDMVRFVML CNSGAQVGYITQREMVDFSMLAARRVQQHYRSWRELAGHFLLARWYWKATDKRHLITHILFKKAITSLLKEQGSPWRTLP WDTPLPEGTETAFAWACGVSTADVVEVQPDTPDKAIYEAN
Sequences:
>Translated_520_residues MERTLPWKPLLCLLFLLSTGCDRAEKQKIAAQLQQDKEAISSVVKKSYRALCGPEFVTSTDSHDRLAEMQQVFTPALMEP VLKFWQESPKTCKRRFPSYSDPLATFIEGDKAQVGAFFGHQSDIDIPMELIRQGDGKWKIAAIDFASLHEFEKNARVTDE VQKQIDLLKKRSFKQHRDSPVLTRTAPERVSKSPLTSVEQTVTEQDSSWLDVLLTIGKYALYLVAIILILALVAVLWIGY GLVFAGHRLFKASCKDPSIQKIPVAERWAMAVGAPYAIAGNNHWARRVVNDDSVEAENDCKSEVESLADMWGVFDRDSLL EQLLALFVAGHRSVYEEQIKNDSEMPDAEYRAFAQQLAQNAKLSSEAKERLWQLQMVRKNRRKICDIDFCAWDMVRFVML CNSGAQVGYITQREMVDFSMLAARRVQQHYRSWRELAGHFLLARWYWKATDKRHLITHILFKKAITSLLKEQGSPWRTLP WDTPLPEGTETAFAWACGVSTADVVEVQPDTPDKAIYEAN >Mature_520_residues MERTLPWKPLLCLLFLLSTGCDRAEKQKIAAQLQQDKEAISSVVKKSYRALCGPEFVTSTDSHDRLAEMQQVFTPALMEP VLKFWQESPKTCKRRFPSYSDPLATFIEGDKAQVGAFFGHQSDIDIPMELIRQGDGKWKIAAIDFASLHEFEKNARVTDE VQKQIDLLKKRSFKQHRDSPVLTRTAPERVSKSPLTSVEQTVTEQDSSWLDVLLTIGKYALYLVAIILILALVAVLWIGY GLVFAGHRLFKASCKDPSIQKIPVAERWAMAVGAPYAIAGNNHWARRVVNDDSVEAENDCKSEVESLADMWGVFDRDSLL EQLLALFVAGHRSVYEEQIKNDSEMPDAEYRAFAQQLAQNAKLSSEAKERLWQLQMVRKNRRKICDIDFCAWDMVRFVML CNSGAQVGYITQREMVDFSMLAARRVQQHYRSWRELAGHFLLARWYWKATDKRHLITHILFKKAITSLLKEQGSPWRTLP WDTPLPEGTETAFAWACGVSTADVVEVQPDTPDKAIYEAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59296; Mature: 59296
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERTLPWKPLLCLLFLLSTGCDRAEKQKIAAQLQQDKEAISSVVKKSYRALCGPEFVTST CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC DSHDRLAEMQQVFTPALMEPVLKFWQESPKTCKRRFPSYSDPLATFIEGDKAQVGAFFGH CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHCC QSDIDIPMELIRQGDGKWKIAAIDFASLHEFEKNARVTDEVQKQIDLLKKRSFKQHRDSP CCCCCCHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC VLTRTAPERVSKSPLTSVEQTVTEQDSSWLDVLLTIGKYALYLVAIILILALVAVLWIGY CEECCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVFAGHRLFKASCKDPSIQKIPVAERWAMAVGAPYAIAGNNHWARRVVNDDSVEAENDC HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHCCCCCCCCHHHH KSEVESLADMWGVFDRDSLLEQLLALFVAGHRSVYEEQIKNDSEMPDAEYRAFAQQLAQN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH AKLSSEAKERLWQLQMVRKNRRKICDIDFCAWDMVRFVMLCNSGAQVGYITQREMVDFSM CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH LAARRVQQHYRSWRELAGHFLLARWYWKATDKRHLITHILFKKAITSLLKEQGSPWRTLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC WDTPLPEGTETAFAWACGVSTADVVEVQPDTPDKAIYEAN CCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure MERTLPWKPLLCLLFLLSTGCDRAEKQKIAAQLQQDKEAISSVVKKSYRALCGPEFVTST CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC DSHDRLAEMQQVFTPALMEPVLKFWQESPKTCKRRFPSYSDPLATFIEGDKAQVGAFFGH CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHCC QSDIDIPMELIRQGDGKWKIAAIDFASLHEFEKNARVTDEVQKQIDLLKKRSFKQHRDSP CCCCCCHHHHHHCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC VLTRTAPERVSKSPLTSVEQTVTEQDSSWLDVLLTIGKYALYLVAIILILALVAVLWIGY CEECCCHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVFAGHRLFKASCKDPSIQKIPVAERWAMAVGAPYAIAGNNHWARRVVNDDSVEAENDC HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHCCCCCCCCHHHH KSEVESLADMWGVFDRDSLLEQLLALFVAGHRSVYEEQIKNDSEMPDAEYRAFAQQLAQN HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH AKLSSEAKERLWQLQMVRKNRRKICDIDFCAWDMVRFVMLCNSGAQVGYITQREMVDFSM CCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHH LAARRVQQHYRSWRELAGHFLLARWYWKATDKRHLITHILFKKAITSLLKEQGSPWRTLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC WDTPLPEGTETAFAWACGVSTADVVEVQPDTPDKAIYEAN CCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA