Click here to switch to the map view.

The map label for this gene is ygfA [H]

Identifier: 218550160

GI number: 218550160

Start: 2915010

End: 2915558

Strand: Direct

Name: ygfA [H]

Synonym: EFER_2849

Alternate gene names: 218550160

Gene position: 2915010-2915558 (Clockwise)

Preceding gene: 218550158

Following gene: 218550163

Centisome position: 63.53

GC content: 51.91

Gene sequence:

>549_bases
ATGATTCGCCAGCGTCGCCGTGCGTTAACGCCACAGCAACAGCTTGATATGGGCCAACAGGCCGCCGCGCGAATGATGAG
TTACCCCCCGGTGGTAATGGCGCATACGGTCGCTGTATTCCTCTCTTTTGATGGCGAACTCGACACCCAGCCGCTCATAG
AACAACTCTGGCGCGCCGGTAAGCGCGTGTATCTTCCCGTTTTGCATCCCTTTAGTGCCGGTAATTTGCTGTTCCTGAAT
TACCATCCGCAAAGTGAACTAGTAATGAACAGGTTGAAGATCCATGAGCCAAAACTGGATGTGCGTGACGTTCTTCCTCT
TTCTCGATTAGACGTGTTGATCACACCGCTGGTCGCCTTTGATGAGTACGGTCAGCGCCTGGGAATGGGCGGTGGTTTTT
ATGATCGGACCTTACAAAACTGGCAGCACTATAAAATGCAACCGGTGGGTTATGCGCATGATTGTCAGTTGGTGGAAAAA
CTCCCCGTTGAAGAGTGGGATATTCCACTTCCTGCGGTAGTTACGCCGTCGAAAGTCTGGGAGTGGTAA

Upstream 100 bases:

>100_bases
GTTACAGCCTGCGGCGGCATCTCGGAGATTCCCTTCTTATCTGGCACCAGCCATGACGCAACTACCTGAACTCCCGCTTT
CCCGACAAGAAATCCGCAAA

Downstream 100 bases:

>100_bases
GGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTAACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGC
TCCTCCCTCTGACTTCTGTT

Product: ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIRQRRRALTPQQQLDMGQQAAARMMSYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLN
YHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKMQPVGYAHDCQLVEK
LPVEEWDIPLPAVVTPSKVWEW

Sequences:

>Translated_182_residues
MIRQRRRALTPQQQLDMGQQAAARMMSYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLN
YHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKMQPVGYAHDCQLVEK
LPVEEWDIPLPAVVTPSKVWEW
>Mature_182_residues
MIRQRRRALTPQQQLDMGQQAAARMMSYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLN
YHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQHYKMQPVGYAHDCQLVEK
LPVEEWDIPLPAVVTPSKVWEW

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Homo sapiens, GI5453746, Length=181, Percent_Identity=25.414364640884, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1789278, Length=182, Percent_Identity=96.7032967032967, Blast_Score=366, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21062; Mature: 21062

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRQRRRALTPQQQLDMGQQAAARMMSYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAG
CCCCHHHCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHCC
KRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAF
CEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHH
DEYGQRLGMGGGFYDRTLQNWQHYKMQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVW
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCHHHC
EW
CC
>Mature Secondary Structure
MIRQRRRALTPQQQLDMGQQAAARMMSYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAG
CCCCHHHCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHCC
KRVYLPVLHPFSAGNLLFLNYHPQSELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAF
CEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHH
DEYGQRLGMGGGFYDRTLQNWQHYKMQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVW
HHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCHHHC
EW
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]