| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218550150
Identifier: 218550150
GI number: 218550150
Start: 2903595
End: 2904533
Strand: Reverse
Name: 218550150
Synonym: EFER_2838
Alternate gene names: NA
Gene position: 2904533-2903595 (Counterclockwise)
Preceding gene: 218550151
Following gene: 218550148
Centisome position: 63.3
GC content: 43.77
Gene sequence:
>939_bases ATGTTTCTTAACTTAGCGCTTTGTTTTTCATACCTGGAGGGAATGATGAAACGATTTATATTTCTGCCATTAATAACATG CTTTCTATCAATGAATGCAATGGCAGCTGACGGAGAAAATAAGCCCAGTAATCTATTAGGTGCACCAGTTAATACCGCTA TTTCTGGTGGTTCAGTATTGCCGGAAGGAATGTTATTAACCGCCGTGAATAGCTCATTTCGCGATAAAGATCATCAAATC GAGGGGCACGGAAGTTCGGATGTTTACTCCCAGATATGGTTATTGAAGATTCGTTACGGTTTGACCGACAGACTGGAATT ATCAACTGTGGGTTCTTATATCAATAACAAACGAGACAATCTGTCTCCTGAGCATATAGAGGGAATGGGCGATCAATCGG TGGGGGCCACTTATGCTTTAATGAGCCAGCGAAGAGGTGATCCGTTTTGGGTTACGGTAGGTGGGGCATTATTACTACCC ACCGGGCAAGGTGGAGATAATCATTTGCCTGGGAACAGCGCCTGGGGAGGAAGAGTATCACTCTCTTTAACAAAATCATT CACTCCTAACTTTAAAGGGGATATGGATTTTGTCTATCAGGGACCATTTGAGCGCGGTAACCAGGATGTGAAACGAGGTA ACGAATTCCAGTGGAATACCCAGGTACGGTATATGTTTAGCGATTTACCGCTGGATATTGGTCTGGAAAGTGCCTACAGC AATAATGCCTCTGGAACGAAAAAACTGCCTAATGGCAGCGTAATTAATACCCATTCTGGAACTACCGAATGGGTTGTTGG TCCGTCATTTAATATTGCCGTCGATTCACTGAAATTATGGTTTGGTGCCGGAGCCTTCTTCCCGGTAATGCAGGAAGCGA AGTCGCCAACCAAAATGGAAGATGTACGCTGGGAATTTAAAATAGGTAAGACCTGGTAA
Upstream 100 bases:
>100_bases CGTTATTTACCTCTCAATATAATTACAAAACTTTCCGTATATTAAATCCATTAAGTTATTTATTTAAATTATAAATTAAA AATAAATATAAATAACGCAA
Downstream 100 bases:
>100_bases GACTCGTCCAAAATGTTACCCGCCAACTGGCGGGTAACATGCAGGAGTTAAAGCTTCTCGCCGTTGCTGGCAATCACCTC TTTGTACCAGTCAAAGCTCT
Product: outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MFLNLALCFSYLEGMMKRFIFLPLITCFLSMNAMAADGENKPSNLLGAPVNTAISGGSVLPEGMLLTAVNSSFRDKDHQI EGHGSSDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDNLSPEHIEGMGDQSVGATYALMSQRRGDPFWVTVGGALLLP TGQGGDNHLPGNSAWGGRVSLSLTKSFTPNFKGDMDFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDIGLESAYS NNASGTKKLPNGSVINTHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKMEDVRWEFKIGKTW
Sequences:
>Translated_312_residues MFLNLALCFSYLEGMMKRFIFLPLITCFLSMNAMAADGENKPSNLLGAPVNTAISGGSVLPEGMLLTAVNSSFRDKDHQI EGHGSSDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDNLSPEHIEGMGDQSVGATYALMSQRRGDPFWVTVGGALLLP TGQGGDNHLPGNSAWGGRVSLSLTKSFTPNFKGDMDFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDIGLESAYS NNASGTKKLPNGSVINTHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKMEDVRWEFKIGKTW >Mature_312_residues MFLNLALCFSYLEGMMKRFIFLPLITCFLSMNAMAADGENKPSNLLGAPVNTAISGGSVLPEGMLLTAVNSSFRDKDHQI EGHGSSDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDNLSPEHIEGMGDQSVGATYALMSQRRGDPFWVTVGGALLLP TGQGGDNHLPGNSAWGGRVSLSLTKSFTPNFKGDMDFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDIGLESAYS NNASGTKKLPNGSVINTHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKMEDVRWEFKIGKTW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34350; Mature: 34350
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLNLALCFSYLEGMMKRFIFLPLITCFLSMNAMAADGENKPSNLLGAPVNTAISGGSVL CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHCCCCCCCC PEGMLLTAVNSSFRDKDHQIEGHGSSDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDN CCCEEEEECCCCCCCCCCEECCCCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCC LSPEHIEGMGDQSVGATYALMSQRRGDPFWVTVGGALLLPTGQGGDNHLPGNSAWGGRVS CCHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCEEE LSLTKSFTPNFKGDMDFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDIGLESAYS EEEECCCCCCCCCCCCEEEECCHHCCCHHHHCCCCEEECCEEEEEEECCCCCCCCHHHCC NNASGTKKLPNGSVINTHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKME CCCCCCCCCCCCCEEECCCCCEEEEECCCCEEEHHHEEEECCCCHHHHHHHHCCCCCCHH DVRWEFKIGKTW HEEEEEEECCCC >Mature Secondary Structure MFLNLALCFSYLEGMMKRFIFLPLITCFLSMNAMAADGENKPSNLLGAPVNTAISGGSVL CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCHHCCCCCCCC PEGMLLTAVNSSFRDKDHQIEGHGSSDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDN CCCEEEEECCCCCCCCCCEECCCCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCC LSPEHIEGMGDQSVGATYALMSQRRGDPFWVTVGGALLLPTGQGGDNHLPGNSAWGGRVS CCHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCEEE LSLTKSFTPNFKGDMDFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDIGLESAYS EEEECCCCCCCCCCCCEEEECCHHCCCHHHHCCCCEEECCEEEEEEECCCCCCCCHHHCC NNASGTKKLPNGSVINTHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKME CCCCCCCCCCCCCEEECCCCCEEEEECCCCEEEHHHEEEECCCCHHHHHHHHCCCCCCHH DVRWEFKIGKTW HEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA