| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
Click here to switch to the map view.
The map label for this gene is V
Identifier: 218550003
GI number: 218550003
Start: 2765339
End: 2765995
Strand: Reverse
Name: V
Synonym: EFER_2688
Alternate gene names: NA
Gene position: 2765995-2765339 (Counterclockwise)
Preceding gene: 218550004
Following gene: 218550002
Centisome position: 60.28
GC content: 54.03
Gene sequence:
>657_bases ATGTGGACGACTATTACCTTATCCTGGAGGCAGGAGCTGATGAGTGACATTACAGGGGATTTGCAACGCAGACTGGCAAA TCTGGTACGACGCGGTGTGATTCATTCTGTCCGGCATGATGGTATCCCCAAATGCCGGGTTGATCTGGGCGATATCATCA CGACCTGGCTGCCGCTGTGTCAGGGTTTTTCTGGCGCAAACCGGGCTGATTCGAATCCTTATGCCGTCGGTGATGCGGTG ACAGTGTTGTCGGAGGCCGGAGAGTTAAACAACGGGCGGGTGTTTCCTGGCTGGAACACCGGGAAATTACCCGTGCCGGA GGGCAGCGACAGCGAACATATTACCCGTTACAGCGACGGCACAGAGATCCGGTATGACCGGGCAGCTCATGCCCTGACGA TCACCCTGACCGAAGGAGGCACTTACAAAATCACCGGTAAGGGTACGCTTGATGGTCCGGTTGAAATCACCGATACCCTG ACTGTACAGGGGAAAACGCAGATTAACGCCGATACGACGGTGAAGGGTAATATTGGTGCCTCTGCAGAAATTACCGACAA AACCGGCAGTATGAGCGGGATCCGCAACATCTTTAACGAGCACAACCACCCCGGCGACAGTGGCGGGAGTACGGATAAAC CTAATCAGAAAATGTGA
Upstream 100 bases:
>100_bases TTTACCCAGGAGGCAGCTTTTGGCGTGGATCCGTTCGCCCGCACCGCTATGCCACTGAGTCAGGTCTGGCTGGGAGTAGC ACCGGATACGGGGCGGCAGC
Downstream 100 bases:
>100_bases CCTGCTGCGGCAGGTTTTTTTATGGCTGGAGAAAGACATGTCTCAGTTACATGGTGTTGAAACAATTGAACTGACCTCGG GAACTGTGGCGGTGACCACT
Product: Baseplate assembly protein V (GpV)
Products: NA
Alternate protein names: Baseplate Assembly Protein V; Phage-Related Baseplate Protein; Phage Baseplate Assembly Protein; Baseplate Assembly Protein GpV; Phage P2-Like Baseplate Assembly Protein; Phage P2 Baseplate Assembly GpV Protein; Bacteriophage Baseplate Assembly Protein V; Prophage LambdaW5 Baseplate Assembly Protein V; Phage-Related Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein V; LOW QUALITY PROTEIN Baseplate Assembly Protein V; Phage P2 Baseplate Assembly GpV-Like Protein; Phage Baseplate Assembly-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPV; Phage P2 Baseplate Assembly Protein GpV
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MWTTITLSWRQELMSDITGDLQRRLANLVRRGVIHSVRHDGIPKCRVDLGDIITTWLPLCQGFSGANRADSNPYAVGDAV TVLSEAGELNNGRVFPGWNTGKLPVPEGSDSEHITRYSDGTEIRYDRAAHALTITLTEGGTYKITGKGTLDGPVEITDTL TVQGKTQINADTTVKGNIGASAEITDKTGSMSGIRNIFNEHNHPGDSGGSTDKPNQKM
Sequences:
>Translated_218_residues MWTTITLSWRQELMSDITGDLQRRLANLVRRGVIHSVRHDGIPKCRVDLGDIITTWLPLCQGFSGANRADSNPYAVGDAV TVLSEAGELNNGRVFPGWNTGKLPVPEGSDSEHITRYSDGTEIRYDRAAHALTITLTEGGTYKITGKGTLDGPVEITDTL TVQGKTQINADTTVKGNIGASAEITDKTGSMSGIRNIFNEHNHPGDSGGSTDKPNQKM >Mature_218_residues MWTTITLSWRQELMSDITGDLQRRLANLVRRGVIHSVRHDGIPKCRVDLGDIITTWLPLCQGFSGANRADSNPYAVGDAV TVLSEAGELNNGRVFPGWNTGKLPVPEGSDSEHITRYSDGTEIRYDRAAHALTITLTEGGTYKITGKGTLDGPVEITDTL TVQGKTQINADTTVKGNIGASAEITDKTGSMSGIRNIFNEHNHPGDSGGSTDKPNQKM
Specific function: Unknown
COG id: COG4540
COG function: function code R; Phage P2 baseplate assembly protein gpV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23520; Mature: 23520
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTTITLSWRQELMSDITGDLQRRLANLVRRGVIHSVRHDGIPKCRVDLGDIITTWLPLC CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHH QGFSGANRADSNPYAVGDAVTVLSEAGELNNGRVFPGWNTGKLPVPEGSDSEHITRYSDG CCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCC TEIRYDRAAHALTITLTEGGTYKITGKGTLDGPVEITDTLTVQGKTQINADTTVKGNIGA CEEEECCCCEEEEEEEECCCEEEEEECCCCCCCEEEEEEEEECCCEEECCCCEEECCCCC SAEITDKTGSMSGIRNIFNEHNHPGDSGGSTDKPNQKM CEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MWTTITLSWRQELMSDITGDLQRRLANLVRRGVIHSVRHDGIPKCRVDLGDIITTWLPLC CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHH QGFSGANRADSNPYAVGDAVTVLSEAGELNNGRVFPGWNTGKLPVPEGSDSEHITRYSDG CCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCC TEIRYDRAAHALTITLTEGGTYKITGKGTLDGPVEITDTLTVQGKTQINADTTVKGNIGA CEEEECCCCEEEEEEEECCCEEEEEECCCCCCCEEEEEEEEECCCEEECCCCEEECCCCC SAEITDKTGSMSGIRNIFNEHNHPGDSGGSTDKPNQKM CEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA