| Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
|---|---|
| Accession | NC_011740 |
| Length | 4,588,711 |
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The map label for this gene is 218549998
Identifier: 218549998
GI number: 218549998
Start: 2760491
End: 2760961
Strand: Reverse
Name: 218549998
Synonym: EFER_2683
Alternate gene names: NA
Gene position: 2760961-2760491 (Counterclockwise)
Preceding gene: 218549999
Following gene: 218549997
Centisome position: 60.17
GC content: 51.8
Gene sequence:
>471_bases GTGAGTAATTTCATGTCTTTTATTGATGAATTTGGTCAGCAACAGGCTGAAAACCTGCGTTCGGCAGGAACCGCCCGCGT GATGATGATGCTGGGAGATTTTGCTTTTTCGATTGATACGACAGCCTATAACCAGCTGACCCGCGAAGCAACCTGGCGCT GGAGCGAACAGGAGCGCATTGGTAAGCAGGATCTTCTCCAGTACACCGGAAAGCCGGGGCGTACCGTCAGACTTGAAGGC GAATCCCATGCCTTTTTTCGAAAAGGTGTTGGCCCCGTCAATGACCTGTTTGCTCTTGCCGACCAGGCGAAGCCACTGCA GCTGGTCAGTGGAGAAGGGGATGTTCTGGGATGGTGGGTGGTAACTGACTTTACTGACACCACTAACCGGTTCCTGCCGG GAGGTGGTCACCGTAATAAAAACTGGACAATGACACTGAAACACTATGCCGACGATATATCAAACCCGTGA
Upstream 100 bases:
>100_bases GGCAGGATGAAAAAGCCATTGCCGATGAACTGACCACGGTCACCCGAAATAATCCGGCTTTTAACGGGGACAACCGTCTG ACGGATGGAGGACTGGTCTG
Downstream 100 bases:
>100_bases CGGTGATGTGCTGGATGCGATTTGCGCCGCGCACTATGGCAGCGAAAATCTCGCTGACACGATAATCCAGGTTCTGGAGG CAAATCCCGGGCTGGCTGAT
Product: Phage-related tail protein
Products: NA
Alternate protein names: Phage P2 GpU; Phage Tail Protein; Phage-Related Tail Protein; Phage P2 GpU Family Protein; Phage Protein U; Phage Tail Protein U; Phage-Related Protein; Pyocin R2_PP Tail Formation Protein; Phage P2 GpU Protein; Pyocin R2_PP Tail Formation Protein GpU; Tail Fiber Protein; Tail Protein U
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSNFMSFIDEFGQQQAENLRSAGTARVMMMLGDFAFSIDTTAYNQLTREATWRWSEQERIGKQDLLQYTGKPGRTVRLEG ESHAFFRKGVGPVNDLFALADQAKPLQLVSGEGDVLGWWVVTDFTDTTNRFLPGGGHRNKNWTMTLKHYADDISNP
Sequences:
>Translated_156_residues MSNFMSFIDEFGQQQAENLRSAGTARVMMMLGDFAFSIDTTAYNQLTREATWRWSEQERIGKQDLLQYTGKPGRTVRLEG ESHAFFRKGVGPVNDLFALADQAKPLQLVSGEGDVLGWWVVTDFTDTTNRFLPGGGHRNKNWTMTLKHYADDISNP >Mature_155_residues SNFMSFIDEFGQQQAENLRSAGTARVMMMLGDFAFSIDTTAYNQLTREATWRWSEQERIGKQDLLQYTGKPGRTVRLEGE SHAFFRKGVGPVNDLFALADQAKPLQLVSGEGDVLGWWVVTDFTDTTNRFLPGGGHRNKNWTMTLKHYADDISNP
Specific function: Unknown
COG id: COG3499
COG function: function code R; Phage protein U
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17656; Mature: 17525
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFMSFIDEFGQQQAENLRSAGTARVMMMLGDFAFSIDTTAYNQLTREATWRWSEQERI CCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECHHHHHHHHHHHHCCCCHHHHC GKQDLLQYTGKPGRTVRLEGESHAFFRKGVGPVNDLFALADQAKPLQLVSGEGDVLGWWV CHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEE VTDFTDTTNRFLPGGGHRNKNWTMTLKHYADDISNP EECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCC >Mature Secondary Structure SNFMSFIDEFGQQQAENLRSAGTARVMMMLGDFAFSIDTTAYNQLTREATWRWSEQERI CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECHHHHHHHHHHHHCCCCHHHHC GKQDLLQYTGKPGRTVRLEGESHAFFRKGVGPVNDLFALADQAKPLQLVSGEGDVLGWWV CHHHHHHHCCCCCCEEEEECCCCHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEE VTDFTDTTNRFLPGGGHRNKNWTMTLKHYADDISNP EECCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA