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The map label for this gene is ycgG [H]

Identifier: 218549983

GI number: 218549983

Start: 2745180

End: 2746721

Strand: Reverse

Name: ycgG [H]

Synonym: EFER_2668

Alternate gene names: 218549983

Gene position: 2746721-2745180 (Counterclockwise)

Preceding gene: 218549984

Following gene: 218549982

Centisome position: 59.86

GC content: 42.93

Gene sequence:

>1542_bases
TTGCTCAGGGATCTGATAATGCGCAATACACTGCTTCCCATAATCGCGGCGTTGTGTCTGTTTATTGCCGGCGTATCAAT
CCTGAATATTCAACTCTGGTACTCTGCAAGGGCTGAGAGTCTGGCAGGGGCACGGTATGCTGCCAATAATATCAATAAAA
TACTCGATGAAGCGGCCGTAGCAATGAGAACAGCAATAACTATCGCTTCAAAAGGATGTGATCCCGAAGAACAATATCAG
CTGGGCACAGAAGCTGCGTTGAAACCGCATTTGCGCACTATTTTAATCATCAGAAACGGTCAAGTCTGGTGCTCATCATT
ACCGGGAAATCGCGCATTACTGGCGCGGATCCCTGACATACCTGGCAGCAATTTACTGCTGGCACCTGCAATCGATACGG
TTAACCGATTACCGATATTGTTGTATCAGACCTTTTCATCGTCCAGCCGAATCCTGGTCACCATTAGCGACCAACATATC
CGGGGCGCACTGAATGTGCCTTTAAAGGGCGTATCGTATGCATTACGGGTGGGCGATAGTATTATTGGTTCATCAGGGGA
TGTTTCTTTAATAAAAGATCATAAGTCTTTTACCAGCAAGGTAAATTCGAAGAAATATCAATTCAGTATTATATATAACC
CGCCGCGGTTATTTAGTATTCCGAGAATCATTGATAAAGGTCTGGGGATATTTATTTTTATATTGTTAATATCTTCCGCT
ACAGCTTATCTAATTAATAAATATATGAAAAAGGATAGTACTCCTGAAGAAACCCTTCGCAGGGCGATTGCTAATGGTGA
AATTGTGCCGTTTTATCAGCCGGTGGTGAATGGTCTCGAAGGAACATTGCGTGGAGTGGAAGTATTAGCCCGATGGAAAC
ATCCAGTTGCAGGCTATATCTCGCCAGTCGCATTTATCCCACTGGCAGAAAAATCGGGCCTGATCATTCCTCTGACACAA
AGTTTAATGCGCCAGGTCGCCAGCCAAATGAATGCTATTTCCAGCAAACTACCGGAAGGCTTCCATGTCGGGATAAACTT
CAGTGCATCGCATATCGCATCGGCCACGTTTGTTGAGGAGTGTCTTGAATACAAAAAAAGTTTTAATCGACAGGACCTGA
ACCTGGTGCTTGAGGTGACCGAACGCGAACAGCTACATGTGGATGAAAGCATGGTACAACGCCTCAATTTTCTGCATGAA
AATGGTTTTGTTATCGCACTTGATGACTTTGGTACTGGCTATTCTGGTCTTTCTTATCTCCATGATTTACATATCGATTA
TATTAAAATTGATCACAGTTTCGTGGGGCGAGTTAATGCCGATCCTGACTCAACCAGAATTCTGGATTGTGTTCTGGATT
TGGCACGTAAGCTCTCCATCAGCATTGTTGCCGAAGGTGTGGAAACGAAGGAGCAACTAGACTATCTGAATCAGAACAAC
ATTACTTTTCAGCAGGGATATTATTTTTATAAACCTGTTACTTACATAGAGTTGATCAAAATTATTCTTTCCAAACCTAA
AGTAAAAGTCATTGTCGAGTAA

Upstream 100 bases:

>100_bases
CGAAATTTTCTCTGGCTTATAGCGATTTTTGCATCTGTCTACCATGCTCTTTGTAGATGTTGTTTGAATGAATACAGGCA
ATATGATGGGGTAACTCCGT

Downstream 100 bases:

>100_bases
ATTATTAGGGATTTATTTTTATGCGTAAAATAAATCCTTACTGCATTAAATACTGCATCTTTTAGTTTCCTGATGAAAAT
AATCCATATTGTTTATTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MLRDLIMRNTLLPIIAALCLFIAGVSILNIQLWYSARAESLAGARYAANNINKILDEAAVAMRTAITIASKGCDPEEQYQ
LGTEAALKPHLRTILIIRNGQVWCSSLPGNRALLARIPDIPGSNLLLAPAIDTVNRLPILLYQTFSSSSRILVTISDQHI
RGALNVPLKGVSYALRVGDSIIGSSGDVSLIKDHKSFTSKVNSKKYQFSIIYNPPRLFSIPRIIDKGLGIFIFILLISSA
TAYLINKYMKKDSTPEETLRRAIANGEIVPFYQPVVNGLEGTLRGVEVLARWKHPVAGYISPVAFIPLAEKSGLIIPLTQ
SLMRQVASQMNAISSKLPEGFHVGINFSASHIASATFVEECLEYKKSFNRQDLNLVLEVTEREQLHVDESMVQRLNFLHE
NGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPDSTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNN
ITFQQGYYFYKPVTYIELIKIILSKPKVKVIVE

Sequences:

>Translated_513_residues
MLRDLIMRNTLLPIIAALCLFIAGVSILNIQLWYSARAESLAGARYAANNINKILDEAAVAMRTAITIASKGCDPEEQYQ
LGTEAALKPHLRTILIIRNGQVWCSSLPGNRALLARIPDIPGSNLLLAPAIDTVNRLPILLYQTFSSSSRILVTISDQHI
RGALNVPLKGVSYALRVGDSIIGSSGDVSLIKDHKSFTSKVNSKKYQFSIIYNPPRLFSIPRIIDKGLGIFIFILLISSA
TAYLINKYMKKDSTPEETLRRAIANGEIVPFYQPVVNGLEGTLRGVEVLARWKHPVAGYISPVAFIPLAEKSGLIIPLTQ
SLMRQVASQMNAISSKLPEGFHVGINFSASHIASATFVEECLEYKKSFNRQDLNLVLEVTEREQLHVDESMVQRLNFLHE
NGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPDSTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNN
ITFQQGYYFYKPVTYIELIKIILSKPKVKVIVE
>Mature_513_residues
MLRDLIMRNTLLPIIAALCLFIAGVSILNIQLWYSARAESLAGARYAANNINKILDEAAVAMRTAITIASKGCDPEEQYQ
LGTEAALKPHLRTILIIRNGQVWCSSLPGNRALLARIPDIPGSNLLLAPAIDTVNRLPILLYQTFSSSSRILVTISDQHI
RGALNVPLKGVSYALRVGDSIIGSSGDVSLIKDHKSFTSKVNSKKYQFSIIYNPPRLFSIPRIIDKGLGIFIFILLISSA
TAYLINKYMKKDSTPEETLRRAIANGEIVPFYQPVVNGLEGTLRGVEVLARWKHPVAGYISPVAFIPLAEKSGLIIPLTQ
SLMRQVASQMNAISSKLPEGFHVGINFSASHIASATFVEECLEYKKSFNRQDLNLVLEVTEREQLHVDESMVQRLNFLHE
NGFVIALDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPDSTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNN
ITFQQGYYFYKPVTYIELIKIILSKPKVKVIVE

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm (Potential). Note=Found associated with the RNA degradosome [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=507, Percent_Identity=79.4871794871795, Blast_Score=837, Evalue=0.0,
Organism=Escherichia coli, GI1786507, Length=256, Percent_Identity=42.578125, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI1788502, Length=442, Percent_Identity=30.316742081448, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI87081980, Length=497, Percent_Identity=28.3702213279678, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI87081743, Length=275, Percent_Identity=32.3636363636364, Blast_Score=149, Evalue=3e-37,
Organism=Escherichia coli, GI87081921, Length=254, Percent_Identity=32.2834645669291, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1787541, Length=238, Percent_Identity=33.6134453781513, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1790496, Length=238, Percent_Identity=31.9327731092437, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI226510982, Length=250, Percent_Identity=30, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1787055, Length=240, Percent_Identity=30, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI87082096, Length=240, Percent_Identity=30.8333333333333, Blast_Score=99, Evalue=5e-22,
Organism=Escherichia coli, GI1788849, Length=256, Percent_Identity=28.125, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 57032; Mature: 57032

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRDLIMRNTLLPIIAALCLFIAGVSILNIQLWYSARAESLAGARYAANNINKILDEAAV
CCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHH
AMRTAITIASKGCDPEEQYQLGTEAALKPHLRTILIIRNGQVWCSSLPGNRALLARIPDI
HHHHHHHHHCCCCCHHHHHHCCCHHHCCCCCEEEEEEECCCEEEECCCCCCEEEEECCCC
PGSNLLLAPAIDTVNRLPILLYQTFSSSSRILVTISDQHIRGALNVPLKGVSYALRVGDS
CCCCEEEECCHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHCCH
IIGSSGDVSLIKDHKSFTSKVNSKKYQFSIIYNPPRLFSIPRIIDKGLGIFIFILLISSA
HCCCCCCEEEEEHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHH
TAYLINKYMKKDSTPEETLRRAIANGEIVPFYQPVVNGLEGTLRGVEVLARWKHPVAGYI
HHHHHHHHHHCCCCHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
SPVAFIPLAEKSGLIIPLTQSLMRQVASQMNAISSKLPEGFHVGINFSASHIASATFVEE
CCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
CLEYKKSFNRQDLNLVLEVTEREQLHVDESMVQRLNFLHENGFVIALDDFGTGYSGLSYL
HHHHHHCCCCCCCEEEEEECCCHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH
HDLHIDYIKIDHSFVGRVNADPDSTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNN
HHCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCC
ITFQQGYYFYKPVTYIELIKIILSKPKVKVIVE
EEEECCEEEECCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MLRDLIMRNTLLPIIAALCLFIAGVSILNIQLWYSARAESLAGARYAANNINKILDEAAV
CCHHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEECCCHHHHCCCHHHHHHHHHHHHHHHH
AMRTAITIASKGCDPEEQYQLGTEAALKPHLRTILIIRNGQVWCSSLPGNRALLARIPDI
HHHHHHHHHCCCCCHHHHHHCCCHHHCCCCCEEEEEEECCCEEEECCCCCCEEEEECCCC
PGSNLLLAPAIDTVNRLPILLYQTFSSSSRILVTISDQHIRGALNVPLKGVSYALRVGDS
CCCCEEEECCHHHHCCCEEEEEEECCCCCEEEEEECCCCCCCEECCCCCHHHHHHHHCCH
IIGSSGDVSLIKDHKSFTSKVNSKKYQFSIIYNPPRLFSIPRIIDKGLGIFIFILLISSA
HCCCCCCEEEEEHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHHHHH
TAYLINKYMKKDSTPEETLRRAIANGEIVPFYQPVVNGLEGTLRGVEVLARWKHPVAGYI
HHHHHHHHHHCCCCHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
SPVAFIPLAEKSGLIIPLTQSLMRQVASQMNAISSKLPEGFHVGINFSASHIASATFVEE
CCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
CLEYKKSFNRQDLNLVLEVTEREQLHVDESMVQRLNFLHENGFVIALDDFGTGYSGLSYL
HHHHHHCCCCCCCEEEEEECCCHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHH
HDLHIDYIKIDHSFVGRVNADPDSTRILDCVLDLARKLSISIVAEGVETKEQLDYLNQNN
HHCCEEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCC
ITFQQGYYFYKPVTYIELIKIILSKPKVKVIVE
EEEECCEEEECCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]